Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01505 ATGGAGGAAAGTCTTTTATCAAAAAAGATAGATGGAAAAACAGAGAGTGATTTGGAAGAGAGGAAGAGAATTAGTTGGGATGTTTACATGAAAGAAATGAAAACGATATGTCACACATCAGTGCCTATGGTGGCTGTGATTTCTTCACAATATTTATTGCAGGTTGTTTCAATTATGATTGTCGGTCACTTAGGTGAACTCTACCTCTCTAGCGCCGCCTTATCAATTTCATTTGCTGGTGTCACTGGTTTCAGTTTCCTGATGGGAATGGCTTGTGGACTAGAAACAACTTGTGGACAAGCTTATGGAGCTAAACAATACAAAAGAATAGGAATGCAAACATACACTGCTATATTTTCTCTCATATTGGTTTGTATTCCACTTTCTTTTCTTTGGATCTACATTGAGAACATACTAGTTTTCACAGGCCAAGACCCTCTAATTGCACATGAAGCAGGAAGATTCACAATATGGCTTATTCCAGCACTTTTTGCATATGGAATACTCCAGCCACTAGTTAGATATTTTCAAATGCAAAGTTTGCTTCTTCCAATGCTTTTAAGCTCTTGTGTCACTCTTTGTATCCATATACCTCTTTGTTGGGCTTTAGTGTTCAAGACAGGGTTGAATAATGTTGGTGGTGCAATAGCAATGAGCATTTCCATTTGGTTAAATGTGATTTTCCTTGGATTATACATGAGATACTCTTCTTCATGTGCAAAAACAAGAGCTCCAATTTCTATGGAGCTATTCCATGGAATTTGGGAGTTTTTTCGCTTTGCTATACCTTCTGCAGTAATGGTTTGCCTTGAGTGGTGGTCTTATGAGCTAATGGTGTTGCTATCTGGGCTGTTACCAAATCCACAACTTGAAACTTCAGTTCTATCAGTTTGTCTCAATACCATTGCAACTCTCTATACAATACCATTTGGAATTGGAGCTGCAGCAAGCACAAGGGTTTCAAATGAATTAGGAGCTGGGAATCCATTTGAAGCACGTGTTGCTGTGTGGGGTGCTATGTCACTTGCACTCATAGAAGCAAGTATAGCGAGTGCAACCCTATTTGCATGCCGCCATGTTTATGGTTATGTTTTCAGCAATGATAAGGAAGTTGTTGATTATGTCACTATCATGGCTCCTTTGGTTTCTATATCTGTTATATTGGATAGCATACAAGGTACTCTTGCAGGGATTTCTAGAGGTTGTGGATGGCAGCACTTGGGAGTTTATGTGAATCTAGGAGCCTTTTACCTCTGTGGGATTCCAGTCGCTGCAGCATTGGCTTTTTGGGTACAAGTGGGAGGAAAAGGACTTTGGATTGGCATACAAGTTGGTGCTGTTGTTCAATGTGTTCTACTTTCTATCATAACAAGTTGTATAAATTGGGAGCAACAGGCAATGAAGGCTAGACACAGGTTGTTTGACTCTCAAATTTCAGTAGAGTAG 1446 0.3956 MEESLLSKKIDGKTESDLEERKRISWDVYMKEMKTICHTSVPMVAVISSQYLLQVVSIMIVGHLGELYLSSAALSISFAGVTGFSFLMGMACGLETTCGQAYGAKQYKRIGMQTYTAIFSLILVCIPLSFLWIYIENILVFTGQDPLIAHEAGRFTIWLIPALFAYGILQPLVRYFQMQSLLLPMLLSSCVTLCIHIPLCWALVFKTGLNNVGGAIAMSISIWLNVIFLGLYMRYSSSCAKTRAPISMELFHGIWEFFRFAIPSAVMVCLEWWSYELMVLLSGLLPNPQLETSVLSVCLNTIATLYTIPFGIGAAASTRVSNELGAGNPFEARVAVWGAMSLALIEASIASATLFACRHVYGYVFSNDKEVVDYVTIMAPLVSISVILDSIQGTLAGISRGCGWQHLGVYVNLGAFYLCGIPVAAALAFWVQVGGKGLWIGIQVGAVVQCVLLSIITSCINWEQQAMKARHRLFDSQISVE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01505 481 TIGRFAM matE: MATE efflux family protein 42 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01505 481 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Car04g01505 481 Pfam MatE 263 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01505 481 Pfam MatE 42 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01505 481 PANTHER PROTEIN DETOXIFICATION 16 471 - -
Car04g01505 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01505 Car-Chr4 15247009 15251930 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01505 04 15247009 15251930 Car04g01505 04 15247009 15251930 ECH
Car04g01505 04 15247009 15251930 Car06g00186 06 2055925 2058872 ECH