Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01504 ATGGAAACATCAAACAAATCAAATCTTGAGACTCCACTGTGTTCAAACCAACATAGAAACCATGAATTGGAATCCCATACATCTGATCAATGTTGTTTCAGCAGAGAAGATGTTATTGAGGAAGCTAAAAAGCAAGTATGGCTAGCAGGGCCTCTTATTGCAGTTAGTTTGTTGCAATATAGTTTACAAATGATATCTATTATGTTTGTTGGTCATCTTGGGAAACTTCCTCTTTCAGGTGCTTCCTTGGGTAGCTCTTTTGCCTCAGTCACTGGTTATAGTGTTCTGTTAGGAATGGGGAGTGCATTGGAGACACTATGTGGCCAAGCCTATGGAGCCAAACAATATCACATGCTAGGAATTCACACACAAAGAGCAATGCTTGTTCTTCTAAGCTTGAGCATTCCCTTATCTTTAATTTGGTATAACACAAGAAACCTTCTCATATCATTAGGCCAAGACCATGAAATATCAACAGAAGCTGGAACCTTTAATAGGTGGATGATCCCTGGTCTTTTTGCATATGCCCTCCTTCAATGCCTTAACAGATTTCTTCAGACACAAAACAATGTTTTTCCAATGTTCATAAGTTCCGGAATCACAACTTTGGTGCATTTTGTGTTTTGTTGGGTTTTTGTGTTTGAATATGAATTTGGAATCAAAGGTGCAGCCTTGGCAATTAGCTTGTCTTATTGGGTTAATGTGTTTATGTTGGTTGTTTACATAAATTCAGCATCAGCTTGTGCATCAACTTGGAATGGTGTTTCCAAAGAAGCTTTGAATGATGTTTTTAGTTTTTTAAAGCTTGCTGTGGCCTCAGCTGTTATGATATGTTTGGAATATTGGTCCTTTGAGATGGTTGTTCTTCTCTCTGGACTTCTACCAAACCCACAACTAGAGACATCTGTATTATCAATAAGCCTTAATACATGTTGGATGGTCTATATGATCTCTGTTGGTCTTGGTGGTGCCATAAGCACAAGAGTGTCAAATGAACTGGGTTGTGGAAATGCACAAGGTGCAGTTTTGGCTCTCTATGTGATGATTGTAATAGCCATAGTAGAGGGCACAACAGTAGTATTGGTTACCATTTTGGTAAGGAATGTTTGGGGAAAACTCTATAGTAATGAAGATGAAGTTATCAAATATGTTGCCAAGATGATGCCTTTGCTGGCACTCTCTGACTTCCTAGATGGTTTCCAGTGTGTTCTCTCTGGAGCTGGTAGAGGTTGTGGTTGGCAAAATGTGTGTGCATTTATAAACCTTGGTGCTTACTATGTTGTTGGAATCCCTTCTTCTATCCTATTTGCATTTGTCTTCCATATTGGAGGGATGGGACTTTGGATGGGAATCATATGTGGGCTTTCTGTTCAAGGGATAGCATTAATTACATTGAATGCCCTTACAAATTGGGATAGAGAGGCTAGGAAAGCGGTTTACGCGAATCAGAAAGCTGAAGTAATGACAAACAGTTAA 1476 0.3916 METSNKSNLETPLCSNQHRNHELESHTSDQCCFSREDVIEEAKKQVWLAGPLIAVSLLQYSLQMISIMFVGHLGKLPLSGASLGSSFASVTGYSVLLGMGSALETLCGQAYGAKQYHMLGIHTQRAMLVLLSLSIPLSLIWYNTRNLLISLGQDHEISTEAGTFNRWMIPGLFAYALLQCLNRFLQTQNNVFPMFISSGITTLVHFVFCWVFVFEYEFGIKGAALAISLSYWVNVFMLVVYINSASACASTWNGVSKEALNDVFSFLKLAVASAVMICLEYWSFEMVVLLSGLLPNPQLETSVLSISLNTCWMVYMISVGLGGAISTRVSNELGCGNAQGAVLALYVMIVIAIVEGTTVVLVTILVRNVWGKLYSNEDEVIKYVAKMMPLLALSDFLDGFQCVLSGAGRGCGWQNVCAFINLGAYYVVGIPSSILFAFVFHIGGMGLWMGIICGLSVQGIALITLNALTNWDREARKAVYANQKAEVMTNS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01504 491 TIGRFAM matE: MATE efflux family protein 51 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01504 491 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 481 - -
Car04g01504 491 CDD MATE_eukaryotic 41 477 IPR045069 GO:0042910|GO:1990961
Car04g01504 491 PANTHER PROTEIN DETOXIFICATION 24 481 - -
Car04g01504 491 Pfam MatE 273 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01504 491 Pfam MatE 51 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01504 Car-Chr4 15239566 15243309 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01504 04 15239566 15243309 Car04g01504 04 15239566 15243309 ECH