Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01499 ATGGCCGCGTCGCAGTCTTCTTCCGCCGCGGGCAACACAAACATCATGCTAGCAATCTTCGAGAAGAAAACAAACACTGTAGATCTTTATCGTCCCCTTCGCAACTACATCGCCTTTCATTACTCCGAACGCGAAGCACAAAACCTCGAAGACGATCTCCAAACCCTAAAACAACTCCGTTCCGATATCGAACGTCAATCCGATCCATCTCTCCCCGCACGCCGTGACCTTTTCCAAACCTACTTCAAAGCTCTCTGTCAAGTCGAAACTCGATTTCCAATCTCACCCGAACCTGATCACGTCAACGCTCTCACCTTCGTTTGGTTCGATGCATTCAAACCGAAGCTAAAAGCATCTCAGCAAAACATTCACCTCGAGAAAGGTTCCGTGTTGTTCAATTTGGGCGCTGTTTACAGTCAGATTGGTTTGACATTCGATCGAAACACCGTCGACGGCCGACGTCAGGCTTCTCATGCTTTTATGGCCGCCGCTGGCTCATTTGCCTTCCTTAGAGATAATGCCTCTATGAAAATCTCCGTTGGAAGTTCAACCACACTCGATTTGTCCATCGAGTGTGCCGGAATGTTGGAGAAGCTTATGCTTGCTCAGGCTCAGGAGTGTGTATTTGAAAACACCATTGCAAAAGGAAGCACTCCTGGTGTTTGTTCTAAGATCTCTAGGCAGGTTGGGTTGTATTACGAGGAAGCATTGTCTGCCTTAAATGGTGCGCCTTTAAGCCAACATTTTGATAAGTCTTGGATAGTTCATGTGCAGTTGAAGACAGCTATATTCTATGCAGAGGCTTGTTATAGAAATGGATTAGAGTTGCATGATAAAGAGGAAATAGCGGAGGAGATTGCAAGGTTGAGGAGTGCTGTTAGTGTGCTTACGGAGGCAAAGAAAAACTCGAAGGGTGCTGCGGCGCAGCTTCTTGATGCAATTAGCAAGTTAGAGGGAAATATTAACAGAAACCTTGAAAGGGCTATTAAGGAGAATGATAGAGTTTACCTGATGAGACCGATGGCTATGAATGAGGTGCTGGATGCGAGCAAAGATAAGATGTTTGCAAGTCTTGTTCCTGACAATAGTGCCAAGGCCCTTTCCAGGTACACTGAAATGGTTGATGACATTATAAGAACACAGGCTGAGAAGTTGCAACAAGCAAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAACTGCCTGATTCTATTCTTGCTTTAGAAGGCAATTATACTCTGCCGACAAATCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGTTGCAGCAGCTTAAGGACCTAAGGAGGGTGAATCAAGAACTGCTTGTCCAAACTGAGGAGTTGTTGCAGAAGGAATCAAGAGAAGATGCTCAATTTAGAAGTCAATTTGGCACCAAATGGACAAGGCCTCAGTCAAGTACTTTAACAAAGAACTTATTGGATAGACTAAATAGGTTTGCAGGTAACTTGAAGCAAGCAGCTGAGAGTGATGTTAGGATTGAGCGATCAGTCAGAGAACATTCAGCACTCATGGCAATCCTTGATGCCCGTCCGATTGAATCTGCACTTCCAAGCTTGGCAAGGCCAATCATGTCTTTTGATCAAACTGAAGATGCTATTGTAGGGTCTCTCAAACAAAGCTTGAGGCAACTTGAAACTCTAGGAGCTCAAAGGGCTGGTCTTGAAGACATGCTTAGAGAGATGAAAAGAAAGGATGATATATTACCCAAGTTGATGACATCCACTGGTTCTTATGAGGATCTTTTTAAAAAGGAGATAGCAAAGTATGATCATATTTGTGAAGATATAGCTCAAAATATTGAGGCACAAGAGCAGCTGTTGCTGCAAATCCAGGCTCAAAATGATGATTTTTCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAAAAATCCTACAAGCAGATTGAAGCTGCCATAGCAAAGTTTCGAGAAATAAAGGACAACATCAATGAAGGGTTAAAGTTCTATGTTACCCTGCAGGATGCGATCACAAATGTAAAGCAGCAGAGCAATGACTTTGTAATGACTAGGAACATCCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTAGCTGGTCTGAGTTTCCAGGATAATAAAAACACAAGTGCCTTTAACAACAACTACCCTTCAGTGGGAAACCAAAATCAAAGATCCAATACACAAACAGATCCTCGTCCACAAACACCTTACTATCAGCCATCTGAGCAGCCACCAGTTCCTTCATATGGTCACCCTCCTCCCCCATATGGCCCTTCACATCATCAACCTCCACCTCCATACCAAATTCCACCAACATCAACTTCCCCGTACCCACCCCCTCAGGTCCATCAGCAACCACCCGCAAACCATGATTACGGCCAACCTGGGTATCCTGGATGGCGTGGTCCATACTACAATGCACATGCACAACAACAACAACCTGTTTCTGGTCCTCGGCCTCCTTATACCATTCCATCTCCATATCCTCCACCTCACCAAGGTGGCTACTATAAGCAGCAATAG 2565 0.4468 MAASQSSSAAGNTNIMLAIFEKKTNTVDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDIERQSDPSLPARRDLFQTYFKALCQVETRFPISPEPDHVNALTFVWFDAFKPKLKASQQNIHLEKGSVLFNLGAVYSQIGLTFDRNTVDGRRQASHAFMAAAGSFAFLRDNASMKISVGSSTTLDLSIECAGMLEKLMLAQAQECVFENTIAKGSTPGVCSKISRQVGLYYEEALSALNGAPLSQHFDKSWIVHVQLKTAIFYAEACYRNGLELHDKEEIAEEIARLRSAVSVLTEAKKNSKGAAAQLLDAISKLEGNINRNLERAIKENDRVYLMRPMAMNEVLDASKDKMFASLVPDNSAKALSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMELPDSILALEGNYTLPTNLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKESREDAQFRSQFGTKWTRPQSSTLTKNLLDRLNRFAGNLKQAAESDVRIERSVREHSALMAILDARPIESALPSLARPIMSFDQTEDAIVGSLKQSLRQLETLGAQRAGLEDMLREMKRKDDILPKLMTSTGSYEDLFKKEIAKYDHICEDIAQNIEAQEQLLLQIQAQNDDFSVIFNLEDYKASREKSYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDNKNTSAFNNNYPSVGNQNQRSNTQTDPRPQTPYYQPSEQPPVPSYGHPPPPYGPSHHQPPPPYQIPPTSTSPYPPPQVHQQPPANHDYGQPGYPGWRGPYYNAHAQQQQPVSGPRPPYTIPSPYPPPHQGGYYKQQ 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01499 854 Gene3D alix/aip1 like domains 406 687 - -
Car04g01499 854 Pfam BRO1-like domain 16 377 IPR004328 -
Car04g01499 854 Gene3D alix/aip1 in complex with the ypdl late domain 364 638 - -
Car04g01499 854 MobiDBLite consensus disorder prediction 718 854 - -
Car04g01499 854 Coils Coil 434 461 - -
Car04g01499 854 Gene3D alix/aip1 like domains 14 363 IPR038499 -
Car04g01499 854 PANTHER PCD6 INTERACTING PROTEIN-RELATED 7 838 IPR045251 GO:0071985
Car04g01499 854 Coils Coil 279 299 - -
Car04g01499 854 MobiDBLite consensus disorder prediction 832 846 - -
Car04g01499 854 Coils Coil 561 581 - -
Car04g01499 854 MobiDBLite consensus disorder prediction 751 799 - -
Car04g01499 854 CDD BRO1_Alix_like_1 16 354 - -
Car04g01499 854 MobiDBLite consensus disorder prediction 718 750 - -
Car04g01499 854 Pfam ALIX V-shaped domain binding to HIV 414 698 IPR025304 GO:0005515
Car04g01499 854 SMART BRO1_2 15 382 IPR004328 -
Car04g01499 854 Coils Coil 39 66 - -
Car04g01499 854 Coils Coil 610 630 - -
Car04g01499 854 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 7 838 - -
Car04g01499 854 ProSiteProfiles BRO1 domain profile. 14 392 IPR004328 -
Car04g01499 854 CDD V_Alix_like_1 360 696 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01499 04 15210353 15216239 Car04g01499 04 15210353 15216239 ECH