Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01497 ATGAAGAACTCAGTGGAAGAAGAAGAAGGTGACGCATTTGTGAGAGCTGCAAAAGCCACCGAGTCTCTTTACCATCTTCGCGACACTTATTATCCCCCAAACCCTTGCGATAGAATCTCCACACTTCAACACAATTCCGATCTCATTCTCAATCTCCTCGATTCCATCCCCATAGAACAAAGAAAATTACCCGCACAACGGGCAATATTTGAATATCTTAGAGGGAAAGTGTTCGATGTATTTCCCGATTATAAGAAAGAAGCCGAGGATCATCTATCAAAAGCTGTTAAGTTGAACCCATCTCTTGCAGATGCGTGGCTATGTTTAGGCAACTGCATATGGAAGAAAGGTGATTTATTGGCAGCAAAGAACTGCCTCAATCTTGCATTAAACAAGGGTCCTAACAAGAAGATTCTTTGTAAATTATCAATGCTTAAAAGAAAAATGTCTAACGGTGCAGATAATGAAGCAGAACTTGTTGAAGAAAGCATTCAACATGCCAGGGATGCAATTGCTTTGGATGTCAAGGATGGGGACTCTTGGTATAATCTTGGAAATGGATATCTTATGAATTTTTTTGTCACTGGAGCTTCGGATCATACCAAACTTTCACAGTCTTTGAAAGCATATCAAATTGCTGAGAAAGATGAAGGGATGAAGTCCAATCCAGACTTTTACTTCAATAGTGCCATTGCTAACAAATATCAAGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTGAGGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAACATTGTCAATTTACTTGACAAGGTGGACAATCTTTTGAAGGTACATGGAAGAGACAGTCGAATCGCCACTTTGGCATCATCGTCGGTTGCTGTAAATTTGATATCGCCATACAGAACAGTTACCGTAGACTTTCTGTCAGAGGGTCTTAATAAAGCTCTAGCAGTAGAGGGGAGGGTGTTATTCTTTATTGGAAGTGACAATATTACTCCCCTATACTATTTGCTTTGTGATTCAAATGGAACTTGCTTTGTTCTCTCTGTTTATCATGTACGTCCTGATGTGATTAAAGGAGGAGATCAACTCACATTGCTCGATCCTTGTTTTCGTAATGTTGATTTGTCCTGGAAGGAGAAGCGTTACCAGTTCAAATCTATACGCCTGAATTTCTATGCGCAAGTGCTTGTTAATGGAAAAACTCTTACTCGTCAACAAGCTGTCTTTACATCGGTAGATGCACAACATGAACCCTGA 1263 0.4078 MKNSVEEEEGDAFVRAAKATESLYHLRDTYYPPNPCDRISTLQHNSDLILNLLDSIPIEQRKLPAQRAIFEYLRGKVFDVFPDYKKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLLAAKNCLNLALNKGPNKKILCKLSMLKRKMSNGADNEAELVEESIQHARDAIALDVKDGDSWYNLGNGYLMNFFVTGASDHTKLSQSLKAYQIAEKDEGMKSNPDFYFNSAIANKYQENYQRALSGFEAAALRDPGLNAAEEVQNIVNLLDKVDNLLKVHGRDSRIATLASSSVAVNLISPYRTVTVDFLSEGLNKALAVEGRVLFFIGSDNITPLYYLLCDSNGTCFVLSVYHVRPDVIKGGDQLTLLDPCFRNVDLSWKEKRYQFKSIRLNFYAQVLVNGKTLTRQQAVFTSVDAQHEP 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01497 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 15 343 - -
Car04g01497 420 Pfam Tetratricopeptide repeat protein 5 OB fold domain 301 411 IPR032076 -
Car04g01497 420 SMART tpr_5 103 136 IPR019734 GO:0005515
Car04g01497 420 SMART tpr_5 223 256 IPR019734 GO:0005515
Car04g01497 420 Gene3D Tetratricopeptide repeat domain 5 277 IPR011990 GO:0005515
Car04g01497 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 15 343 - -
Car04g01497 420 SUPERFAMILY TPR-like 74 247 IPR011990 GO:0005515
Car04g01497 420 Gene3D - 278 419 IPR038645 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01497 04 15177304 15187443 Car04g01497 04 15177304 15187443 ECH