Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01484 ATGGTGGTTTTTGGCGGGAAAAAGGTGCATCAAATTGTCACCGGCTTCGGCGGCAGTGGTCTCGGCCAGGTAGTCGTCGCCGTCGCCGTCTCTCTCCTTGTTCGCATCTTCTCCGCACCCGGCCCCGCTCTCTTGCCGGAGAACGACGATGATCCAAACAACGATTCCCACGACGGTGAAATTCCTTCTCCCTCCGGAAAGGTTACGCCGGTCACAATCCGCTGGAACAATATCAATTGCTCCCTTTCTGATAAATCCTCCAACTCCGTGAGGTTTTTACTTAGAAATGTGAGTGGAGAAGCAAAGCCAGGAAGATTATTAGCTATAATGGGGCCTTCAGGTTCAGGGAAGACAACATTGCTTAATGTTCTTGCTGGTCAGCTCACAGCGTCGGCCCGGCTTCATTTGAATGGCCTTTTGGAGTTCAATGGAAAGCCTAGTTCCAGAAACACTTATAAGTTTGCTTATGTGAGACAGGAGGATCTCTTCTTCTCACAGCTTACTGTGAGGGAAACATTGTCTCTCGCTATAGAACTACAGCTTCCTAACATTACTTCGACAGAAGAGAGGGACGGATATGTCAACAATCTCCTTTTCAAACTAGGTTTGGTCAGCTGTGCTGATACCAACGTTGGCGATGCAAAAGTACGTGGAATTAGTGGTGGTGAAAAGAAACGTTTATCCCTGGCATGTGAACTACTTGCAAGCCCATCTGTTATATTTGCTGATGAGCCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTTATGGAAACTCTCCAAGAACTTGCTCTAGATGGTCATACTGTAATTTGTTCAATACATCAGCCAAGAGGTTCAGTATATAGCAAATTCGATGACATTGTCTTGCTAACCGGGGGTACACTTGTTTATGCTGGTCCTGCTCGTGATGAACCATTGGCATACTTTTCAAAATTCGGGTACCACTGCCCAGATCATGTAAATCCGGCTGAATTTTTGGCCGATCTTATATCTATAGACTACAGTTCTGCTGATAGTGTGTATTCCTCTCAAAAAAGGATTGACGGGTTAGTTGAGTCATTCTCACATAGACTATCTACAATAATATATGCCACTCCAATTACTTTAGACGATCTCTCTAAAAGTAGAAAGAGAATCAGAATGAGGACTGTAGCAAAGAAGAAAGGGTGCTGGTGGAAACAATTCTGCTTGCTTCTTAGACGGGCATGGATGCAGGCTTCCCGTGATGCACCTACCAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCCCTCACAAAGACTGTAGGCGTGTTTCCAAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCTTATTCTTTGGGACCATATTTGTTTTCGAAATTGTTGGCTGAGAGTCCTATTGGAGCAGCATTTCCTTTAATGTTTGGTGCTGTTTTGTACCCAATGGCACGTCTTCATCCTACTTTGATGAGATTTGGGAAATTCTGTGGAATCGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTGGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACCGTTTTTATAGTGTTTGGTGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAAGGACTTTGCATCAATGAATTCAGTGGTCTTCAATTTGATCATCAGCATTCATTTGATATTCAAACTGGAGAGCAGGCACTAGAGCGTCTTTCCTTTGGAAAAATTAGGATTAGGGATACAGTGATAGCGCAAAGTAAAATATTGTTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAATGACCCCTCCTGACCTCAGCAAACCACATTTAAAACTCGAGGAATTCAATGCTGAACAAGTTGATCAGACACATGAAGCACCAGAGGTTGACCAAGTTGGTTCGGACGAGCCCATTGAGTCACCTGAAGTAGACCCTGTTGGCTCTTTTATTCTAGAAGGTTTGTAA 2175 0.4437 MVVFGGKKVHQIVTGFGGSGLGQVVVAVAVSLLVRIFSAPGPALLPENDDDPNNDSHDGEIPSPSGKVTPVTIRWNNINCSLSDKSSNSVRFLLRNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLTASARLHLNGLLEFNGKPSSRNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLPNITSTEERDGYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLQELALDGHTVICSIHQPRGSVYSKFDDIVLLTGGTLVYAGPARDEPLAYFSKFGYHCPDHVNPAEFLADLISIDYSSADSVYSSQKRIDGLVESFSHRLSTIIYATPITLDDLSKSRKRIRMRTVAKKKGCWWKQFCLLLRRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAESPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFDHQHSFDIQTGEQALERLSFGKIRIRDTVIAQSKILLFWYCTTYLLLEKNKPKYQQLEMTPPDLSKPHLKLEEFNAEQVDQTHEAPEVDQVGSDEPIESPEVDPVGSFILEGL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01484 724 CDD ABCG_EPDR 70 301 - -
Car04g01484 724 Gene3D - 66 308 IPR027417 -
Car04g01484 724 MobiDBLite consensus disorder prediction 686 716 - -
Car04g01484 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 319 IPR003439 GO:0005524
Car04g01484 724 Pfam ABC-2 type transporter 276 333 IPR043926 GO:0140359
Car04g01484 724 Pfam ABC-2 type transporter 396 606 IPR013525 GO:0016020|GO:0140359
Car04g01484 724 Pfam ABC transporter 94 246 IPR003439 GO:0005524
Car04g01484 724 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 674 - -
Car04g01484 724 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 674 - -
Car04g01484 724 MobiDBLite consensus disorder prediction 686 701 - -
Car04g01484 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 305 IPR027417 -
Car04g01484 724 MobiDBLite consensus disorder prediction 44 67 - -
Car04g01484 724 SMART AAA_5 103 296 IPR003593 -
Car04g01484 724 ProSitePatterns ABC transporters family signature. 219 233 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01484 Car-Chr4 15045660 15053553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01484 93 301 Calmodulin-binding Proteins AT2G36910 25.822 1.41e-09 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01484 04 15045660 15053553 Car04g01484 04 15045660 15053553 ECH