Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00381 ATGGACACAACTCAGTGCCCACAGGAGATAGTAGCAACAAAAAATACATGTGAAAAAGCAATGTTAGAGAGAAAAGCAAGACCACAAAAAGAAGAAGCTATAAACTGTCCAAGGTGTAATTCAATTAACACAAAATTCTGTTACTACAACAATTATAGCCTCACACAACCAAGATATTTTTGCAAAACATGTAAAAGGTATTGGACTCAAGGTGGATCTCTTAGAAACATTCCTGTTGGTGGTGGTTCAAGAAAAAACAAAACTACTACAACAACTTCTAATTCATCAAAAAACCTACCTCAAACTTTGTTGTCACAACAAAACCACAAGATCCATCATGAAGAACAAAAACAAGATCTGAATTTAAGATCTTGTGGTAACATAACTGATTTGATTCAACAAAACAACAACAAAAGTTCTGTTTCTTCATCAACTTCAACTACAACTATTGATCCTATTAGTGCTGCTTCAACTTCTCATCATAATCTTTCAGCATTGGAGCTTCTTACTGGAATAACTACAAGTTCAAGGGGTTTGCAATATTCTTTTATGCCTCTTATTCAAGGTGATAATTCCAACAATGTTTACAGTAATAATTGTGGATTTCCAGTTCAAGATTTTAAGCAAGTGCCAATGAATTTTTCTTTGGATGGAATTGGAGGAAGTGAGTTTGCAAGTGTTGATCATCATCATCATGGTGTGGAAGAGAGTAGTGAAGGGAGGGTTTTGTTTCCCTTTGAGGATTTGAAACAGGTTTCAAGTACCAACCTAACATTGGATCAGAATAATATTAAGGATGAACAAGGTTATAATTCAAGTGGGTTTTGGACTGGAATGTTGggaggaggaggaggaggaggCTCATGGTAA 870 0.3402 MDTTQCPQEIVATKNTCEKAMLERKARPQKEEAINCPRCNSINTKFCYYNNYSLTQPRYFCKTCKRYWTQGGSLRNIPVGGGSRKNKTTTTTSNSSKNLPQTLLSQQNHKIHHEEQKQDLNLRSCGNITDLIQQNNNKSSVSSSTSTTTIDPISAASTSHHNLSALELLTGITTSSRGLQYSFMPLIQGDNSNNVYSNNCGFPVQDFKQVPMNFSLDGIGGSEFASVDHHHHGVEESSEGRVLFPFEDLKQVSSTNLTLDQNNIKDEQGYNSSGFWTGMLGGGGGGGSW 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00381 289 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Car04g00381 289 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Car04g00381 289 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Car04g00381 289 MobiDBLite consensus disorder prediction 82 99 - -
Car04g00381 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 281 IPR045174 GO:0003700|GO:0006355
Car04g00381 289 MobiDBLite consensus disorder prediction 76 99 - -
Car04g00381 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 8 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00381 Car-Chr4 3866888 3868396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00381 1 283 C2C2-Dof Transcription Factor Family AT4G24060 38.483 2.00e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car04g00381 zf-Dof 2.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00381 - - cam:101489067 536.954