Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01913 ATGAACATGTCTGAGACTGAGAAGGATCCTGTTTTTAAGCTATTTGGCTGGAAGATTCCGTTGCCGGAATGTCAAATTCCGGCCAACTCTCCACCCAAGGATACTTGTAGCAGTACAAAGAAAACAGAAGTGGAAATACTTAGTTCAGAAAAAAATGAGCAACAAGAGAATTCTTCTGATTCAATGGATAGTAAACAAGAGTCTCAACATAATATGAAGGAAAAGGAACCGAAAGAAAACTCAAAGCCTGCCGAAGATGACAGGGAGACCAGTGAGACAGATGAAGATAAAACCTTAAAAAAACCAGAGAAGATTATTCAGTGTCCGAGATGCAATAGTTTGGACACCAAATTTTGTTATTTCAATAACTATAATGTGAATCAACCTCGGCATTTCTGTAAGAACTGCCAAAGGTATTGGACGGCTGGTGGAACGATGAGGAATGTTCCAATTGGTGCTGGTAGGCGGAAGAATAAGCACTTAGTTTCTCAATACCGACATATTATAGTAACCTCCGATGGAATTCCAAACACAAGCTCATCCGGTCACAACCATGTATCAAGTCTGGATTTGTCAGGTTGTTACAGATCTTCATCTGATAATGAAACTGTATTAAAATTCGGTCCAGATACCCCTATTTGTGAACCGATGGAGTCGATGCTTAATCTTCAACAGCAGAAAAGAAGTGCTGATGCAGATTCTATTAATACTGTGCAGCATAGAGAGGAACCATCTTTATGCAGATCTTCTGTGACAAATACTGGTACTCAAGGAAACGAATTGTCGGAACAAAACATGTCGAATTGGTTCCAGTGTTATCCTGTTCATCCTTGGGTATTACCGATGAATCCGAGTTGGAATAATGTTGCTTCAATGGCAGCAGTTCATCCAATTTCAGCATCCATGTGCAACCCTTATAGCGCGGCTCCAACTGCAATGCAATGGTGTCCGGCGCCTTTGTTGGCAATTCCGGGAATTAGGCCACAAAACATACCTTTGCAACTTGTATCAGCATCACACTGGAATGGACAGCCGATTTTGGCTGCTGGAACCGGAACGGTATCTATAGGATCCAGCGCTTGCATCTCGCCGCCTTCCTCCACAAGTAACAGCTGCTACTCGGGCAATGGCTCCGCCACCTTAGGAAAACACACTAGAGATACAGTTTTTGCAGATGAAGATAAATCAGACAAGCATGTTCAGGTTCGAAAAATGCTTAGAATCGATGTTACCGACGAGGACCCAAAAAGTCCTATCAGAGCTACATTAGCTATCAAGAAGCCTAATGAACAAGGCAAAGAAAGCATATAA 1311 0.4211 MNMSETEKDPVFKLFGWKIPLPECQIPANSPPKDTCSSTKKTEVEILSSEKNEQQENSSDSMDSKQESQHNMKEKEPKENSKPAEDDRETSETDEDKTLKKPEKIIQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLVSQYRHIIVTSDGIPNTSSSGHNHVSSLDLSGCYRSSSDNETVLKFGPDTPICEPMESMLNLQQQKRSADADSINTVQHREEPSLCRSSVTNTGTQGNELSEQNMSNWFQCYPVHPWVLPMNPSWNNVASMAAVHPISASMCNPYSAAPTAMQWCPAPLLAIPGIRPQNIPLQLVSASHWNGQPILAAGTGTVSIGSSACISPPSSTSNSCYSGNGSATLGKHTRDTVFADEDKSDKHVQVRKMLRIDVTDEDPKSPIRATLAIKKPNEQGKESI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01913 436 Pfam Dof domain, zinc finger 104 160 IPR003851 GO:0003677|GO:0006355
Car03g01913 436 MobiDBLite consensus disorder prediction 22 101 - -
Car03g01913 436 MobiDBLite consensus disorder prediction 38 60 - -
Car03g01913 436 PANTHER CYCLIC DOF FACTOR 2 3 431 IPR045174 GO:0003700|GO:0006355
Car03g01913 436 ProSitePatterns Zinc finger Dof-type signature. 108 144 IPR003851 GO:0003677|GO:0006355
Car03g01913 436 ProSiteProfiles Zinc finger Dof-type profile. 106 160 IPR003851 GO:0003677|GO:0006355
Car03g01913 436 MobiDBLite consensus disorder prediction 416 436 - -
Car03g01913 436 PANTHER CYCLIC DOF FACTOR 3-LIKE 3 431 - -
Car03g01913 436 MobiDBLite consensus disorder prediction 66 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01913 Car-Chr3 65230119 65232690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01913 9 427 C2C2-Dof Transcription Factor Family AT5G39660 32.211 3.01e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car03g01913 zf-Dof 4.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01913 - - cam:101500722 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01913 03 65230119 65232690 Car03g01913 03 65230119 65232690 ECH