Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00072 ATGTCTAAAATGTTTACCTTTTCTGATCATGAGATGGTTTTGATCTTTGGTCTCCTAGGAAACATTGTGTCATTCTTGGTGTTCTTAGCTCCCTTGCCAACCTTCTATTCAATTTGCAAGAAAAAAACATCTGAAGGATTTCAATCAATCCCATATGTGGTTGCACTTCTAAGTGCAATGTTATTGCTATATTATGGTCTTCTAAAGACCAATGCCATTTTGATTATCACAATCAATTGTATTGGATGTGTTATAGAAGTTTTATACTTAATAATTTACATCATATATGCTCCAAGGAAGCTCAAGATATCAACTTTAGCTTTGATACTTGTGGCTGATCTTGGAGGTCTTGGTTTGACCTTGATAATTACCAACTTTATTGTGAAGAGTTACTATCGTGTTCATGCTGTTGGATTGATTTGTGCCATTTTTAACATTGCAGTCTTTGCTGCTCCCTTAAGCATAATGAGGAAGGTCATAAAAACAAGAAGTGTAGAGTACATGCCATTTTTCTTATCATTGTTTCTTACTCTATGTGCCACCATGTGGTTTTTCTATGGACTCTTTGACAAGGATAACTACATCATGCTTCCAAATGTGTTAGGATTTCTATTTGGAATTTCTCAAATGATCTTGTACCTCATATACAAGAATGCTAAGAATAAAGTAGAAGCTAATAGTAATGAGCAGCAAGAATATGGTGATGATGATGGCAATAAAGAGGATTTCCCTTCAATAGTTGAAATGAAAGAGAATATAGTTTGA 765 0.3412 MSKMFTFSDHEMVLIFGLLGNIVSFLVFLAPLPTFYSICKKKTSEGFQSIPYVVALLSAMLLLYYGLLKTNAILIITINCIGCVIEVLYLIIYIIYAPRKLKISTLALILVADLGGLGLTLIITNFIVKSYYRVHAVGLICAIFNIAVFAAPLSIMRKVIKTRSVEYMPFFLSLFLTLCATMWFFYGLFDKDNYIMLPNVLGFLFGISQMILYLIYKNAKNKVEANSNEQQEYGDDDGNKEDFPSIVEMKENIV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00072 254 PANTHER RAG1-ACTIVATING PROTEIN 1 8 231 - -
Car03g00072 254 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET9 8 231 - -
Car03g00072 254 Gene3D - 13 100 - -
Car03g00072 254 Pfam Sugar efflux transporter for intercellular exchange 15 100 IPR004316 GO:0016021
Car03g00072 254 Pfam Sugar efflux transporter for intercellular exchange 136 220 IPR004316 GO:0016021
Car03g00072 254 Gene3D - 135 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00072 Car-Chr3 1715439 1718290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00072 10 235 Miscellaneous Gene Families AT2G39060 60.177 5.98e-89 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00072 03 1715439 1718290 Car03g00072 03 1715439 1718290 ECH
Car04g01523 04 15515418 15521858 Car03g00072 03 1715439 1718290 ECH