Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01115 ATGATCATGAAGACCTTTGCGATCATGCAGACCTTAACTCTAGTTTACACTCATCTTAAATGGATATTAGATTTCCTTGTATACCATCCCTTCTATAAGCTCCATGATTGTCATCTTCCAATATTTGAAGAAGATTACAGTATATGGAATTATAAACGAACCCCTGGCTCAGAGGAAGATGTAGATTGTGCAGTGTGTCTCTGCCAAATAAAAGAAGGAGATGAGATTAGAATATTGAGATGTGAACATATGTATCACATAAACTGTTTGGATAAATGGATTAGTTTTAAGAAAGACACTTGTCCTCTCTGCAGAGAATCATTGAGACCAAGAAGGGACACCACTGAGCTTGGAGCTGAAGTTCTATTATTTAATTTTGGTACCTTCCGTACAGATAGAGATTGTGATGATTGGTGGCTACGTTGA 426 0.3709 MIMKTFAIMQTLTLVYTHLKWILDFLVYHPFYKLHDCHLPIFEEDYSIWNYKRTPGSEEDVDCAVCLCQIKEGDEIRILRCEHMYHINCLDKWISFKKDTCPLCRESLRPRRDTTELGAEVLLFNFGTFRTDRDCDDWWLR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01115 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 114 IPR013083 -
Car02g01115 141 SUPERFAMILY RING/U-box 57 115 - -
Car02g01115 141 SMART ring_2 63 104 IPR001841 -
Car02g01115 141 PANTHER RING ZINC FINGER PROTEIN-RELATED 9 132 - -
Car02g01115 141 Pfam Ring finger domain 62 105 IPR001841 -
Car02g01115 141 ProSiteProfiles Zinc finger RING-type profile. 63 105 IPR001841 -
Car02g01115 141 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 9 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01115 Car-Chr2 31492798 31493223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01115 44 132 C3H Transcription Factor Family AT4G28890 31.522 3.96e-13 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01115 02 31492798 31493223 Car02g01115 02 31492798 31493223 ECH