Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01114 ATGATCATGAAGACCTTTGCGATCATGCAGACCTTAACTCTAGTTTACACTCATCTTAAATGGATATTAGATTTCCTTGTATACCATCCCTTCTATAAGCTCCATGATTGTCATCTTCCAATATTTGAAGAAGATTACAATATATGGAATTATAAACGAACCCCTGGCTCAGAGGAAGAAGTAGATTGTGCAGTGTGTCTCTGCCAAATAAAAGAAGGAGATGAGATTAGAGTATTGAGATGTGAACATATGTATCACATAAACTGTTTGGATAAATGGATTAGTTTTAAGACAGACACTTGTCCTCTCTGCAGAGAATCATTGAGACCAAGAAGGGACACCACTGAGCTTGGAGCTGAAGTTCTATTATTTAATTTTGGTACCTTCCGTACAGATAGAGATTGTGATGATTGGTGGCTACGTTGA 426 0.3732 MIMKTFAIMQTLTLVYTHLKWILDFLVYHPFYKLHDCHLPIFEEDYNIWNYKRTPGSEEEVDCAVCLCQIKEGDEIRVLRCEHMYHINCLDKWISFKTDTCPLCRESLRPRRDTTELGAEVLLFNFGTFRTDRDCDDWWLR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01114 141 SMART ring_2 63 104 IPR001841 -
Car02g01114 141 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 9 132 - -
Car02g01114 141 SUPERFAMILY RING/U-box 57 115 - -
Car02g01114 141 Pfam Ring finger domain 62 105 IPR001841 -
Car02g01114 141 ProSiteProfiles Zinc finger RING-type profile. 63 105 IPR001841 -
Car02g01114 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 114 IPR013083 -
Car02g01114 141 PANTHER RING ZINC FINGER PROTEIN-RELATED 9 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01114 Car-Chr2 31481250 31481801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01114 61 125 C3H Transcription Factor Family AT1G53820 45.455 3.41e-13 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01114 02 31481250 31481801 Car02g01114 02 31481250 31481801 ECH