Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01033 ATGAGTAGCAATTGCCAAACTTCTGGTTCTAGTCACAATATCAGAGGTTTAATTTCCAACGCTGGTGCTGGTGCCGCTGCTGGGGCAATAGCTGCTACATTTGTGTGTCCATTGGATGTGATCAAGACAAGGTTACAAGTTCATGGCCTTCCACCTGTTCAGAAAGGTAGTGTTATTGTCACGAGCTTGCAGAATATAGTTAGGACTGAAGGCTTCAGGGGAATGTATCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAATTGGGCAGTTTACTTCACATGTTATGAGCAACTAAAGGGCTTGCTTCGTTCACATGATGGTTGCCACGAACTCACGACTATTGGAAATATTATAGCTGCTGCTGGTGCTGGGGCAGCAACATCAATATCTACAAATCCATTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGTGTTCTTGCCGCTTTGACAAGGATTACACACGAGGAAGGCCTAAGAGGACTATATAGTGGCATTGTGCCTTCATTAGCTGGTGTAAGTCATGTAGCAATTCAATTCCCAGCATATGAAAAGATAAAGTTATACATGGCAAAAAAAGATAACACAACTGTCGACAAGTTAAGTCCTGGCAATGTTGCTATTGCGTCATCAATATCTAAAGTAACTGCCTCTGTAATGACTTATCCGCACGAGGTAATACGCTCCCGGCTACAAGAACAAGGTCAAGCAAAAAATAGTGGCGTTCAATATGCCGGTGTTATTGACTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCGGGTTTCTATCGCGGTTGTGCTACTAATCTATTAAGAACAACTCCGTCTGCTGTTATTACATTCACCAGTTATGAGATGATACACAGGTTTTTGATGCGTAATATACCACAGAACAAAGCGTATTCACAAGGCTCTTCTAAATCAAATGAACCTAACAAACCCAATTCAGAAACCAGTGACATTAACACTAAAAACGACGGCGATAGGGGCCAATCACCGTCTCAATCTAACAAGATTCCTCTCAGAAACAAAGAGCAGCTAACAAGACATTGA 1092 0.4212 MSSNCQTSGSSHNIRGLISNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPVQKGSVIVTSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTCYEQLKGLLRSHDGCHELTTIGNIIAAAGAGAATSISTNPLWVVKTRLQTQGMRPDVVPYKSVLAALTRITHEEGLRGLYSGIVPSLAGVSHVAIQFPAYEKIKLYMAKKDNTTVDKLSPGNVAIASSISKVTASVMTYPHEVIRSRLQEQGQAKNSGVQYAGVIDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLMRNIPQNKAYSQGSSKSNEPNKPNSETSDINTKNDGDRGQSPSQSNKIPLRNKEQLTRH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01033 363 MobiDBLite consensus disorder prediction 313 355 - -
Car02g01033 363 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Car02g01033 363 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Car02g01033 363 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Car02g01033 363 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Car02g01033 363 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Car02g01033 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Car02g01033 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Car02g01033 363 SUPERFAMILY Mitochondrial carrier 18 299 IPR023395 -
Car02g01033 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Car02g01033 363 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Car02g01033 363 Pfam Mitochondrial carrier protein 18 106 IPR018108 -
Car02g01033 363 Pfam Mitochondrial carrier protein 213 307 IPR018108 -
Car02g01033 363 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 11 312 - -
Car02g01033 363 MobiDBLite consensus disorder prediction 313 363 - -
Car02g01033 363 Gene3D Mitochondrial carrier domain 109 308 IPR023395 -
Car02g01033 363 Gene3D Mitochondrial carrier domain 2 108 IPR023395 -
Car02g01033 363 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 312 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01033 Car-Chr2 22755881 22760604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01033 33 352 Chloroplast and Mitochondria Gene Families AT1G25380 67.593 1.54e-150 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01033 02 22755881 22760604 Car02g01033 02 22755881 22760604 ECH