Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01030 ATGGAAGATCAAATCCACAACCACACTAAAAGAATAAACACCAATTCCACCACGTGCTTAAAACTCTTCGGTTTCAGCGTCCAAGAAGAAAACGATGACGAATCACAAGCAACACAACCACTTCAAGACGCGTCCGACTCAGCCGTAAAAGGCAGCACCGGCAACACTTCACCGTCCGGGTCGACCGAATCCGTCTCTGTAGACGGTGGCACTTCCGGTTTAAATCCGTCCTCAGGCGATCGGAAATACGAGTGCCAATATTGCTGTCGAGAGTTTGCAAACTCTCAAGCTCTTGGCGGACACCAAAACGCGCACAAAAAAGAACGCCAACAGCTTAAACGGGCACAGTTACAAGCTACACGAAACGCTGCCGTTTCGTTTGTTAGAAACCCGATCATCTCCGCTTTCGCTCCGCCATCACATCTGCTAGCTTCGCCGGGACAAGTGGTGATGCCAGCTACTCCTCCTTCGTGGGTCTACATGCCTCAACGTACTGCTCCTCCTCCTTTCCACGTGTCAGTTTCACACGGTTGTGCTTTCCCGTCTCCGAACAACAACGGTATTGGTAACTGCAACGGTGGTGGCAACAATTATTTTAGCATTATAACAGGTGCAAGATCCGCGAGTGCAGGTGTCTTACCGTGCGTTGGCGGTGTAGCGGATTCTTCAACCACATTGTCGACGATGGGCTCAGAAGTACATAGCATGGCCCAGTTTGGGAAACTTGATGGGCCATCTTTGAGTAGGTTCACAAAAGGTGATGTAGGGCCCAACTTTGATGATGGATTTGGTTTAGATTTACATCTTAGCCTAGCCCCGCCTTGA 825 0.4982 MEDQIHNHTKRINTNSTTCLKLFGFSVQEENDDESQATQPLQDASDSAVKGSTGNTSPSGSTESVSVDGGTSGLNPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPSHLLASPGQVVMPATPPSWVYMPQRTAPPPFHVSVSHGCAFPSPNNNGIGNCNGGGNNYFSIITGARSASAGVLPCVGGVADSSTTLSTMGSEVHSMAQFGKLDGPSLSRFTKGDVGPNFDDGFGLDLHLSLAPP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01030 274 PANTHER ZINC FINGER PROTEIN GIS3 12 273 - -
Car02g01030 274 MobiDBLite consensus disorder prediction 30 78 - -
Car02g01030 274 PANTHER ZINC FINGER PROTEIN 5 12 273 IPR044299 GO:0010090
Car02g01030 274 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Car02g01030 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Car02g01030 274 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Car02g01030 274 Gene3D Classic Zinc Finger 62 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01030 Car-Chr2 22370722 22371932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01030 16 273 C2H2 Transcription Factor Family AT1G68360 44.322 7.11e-53 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01030 02 22370722 22371932 Car02g01030 02 22370722 22371932 ECH