Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00965 ATGGCGGGACCATCATGGCTAGTGGACAAAAGTAGGATTGCAACCAAAATAAGAAGTGCATCAGGAGCATGTCATCCCGAAAATGTTACATGGAAAAGCAATCCATCCAAGACTTGCCCAAATTGTCAGCATGCTATAGACAATAGTGATGTTGCACAAGAGTGGCCCGGCTTGCCAAAAGGGGTCAAATTTGATCCATCTGATCAGGAGATAATTTGGCACTTACTTGCAAAAGTTGGTGTAGGAAATTCAAAACCTCATCCTTTCGTTGACGAGTTTATTACTACTCTTGAAGTGGATGATGGAATTTGTTACACTCATCCTCAAAACTTACCCGGTGTTATGCAAGATGGAAATGCATCCCACTTCTTCCACCGAGCAGTTAAGGCTTATAACACTGGCACCCGAAAGCGCCGAAAAATACATGATCAGGATTTTGGTGATGTCCGTTGGCACAAAACTGGAAAAACTAAACCAGTAATTCTGAATGGAGTCCAAAAAGGCTTTAAGAAGATTATGGTTCTATATATGAGCAGTGTCGGAGGAGGAAAAGCCGAGAAAACAAATTGGGTTATGCACCAGTATCATCTAGGAACAGATGAAGAGGAAAATGATGGGGAGTTTGTTGTCTCTAAAGTGTTTTACCAGCAGCAGCAAGTCAAATTGGGTGATAAAAATGAATTGGACATTCCTGAAGCCACTGAAGCAACAATTATTAAAGTGGATCCGGTTACTCCCAAATCTGTGACTCCTGAGCCTCCTTATAATGAAAGGCAGTATTCAGATGTAGATCTAGGACAAGAAACACCTGCCATTCCTCAGCCTCCTCAGATGGATTGTCTGGATGAAATACAAGCTGATTGTGAAGAGCATGCAATAGATGATTTATCCATGATAGAAACTGAAAATAATGAAGAGACATATGATAAAGAAATTAATGCTGATGAAGGCCAAAAATGGTGGGATAGTGAATCACAAAATCTGTTGGATTCACAACAACTGGTTGAAGCATTGTCCTTGTGCGATGATTTACTTCATAGCCAGTCTCCCGAAAGAGATGACGAACATGGAGAACATAAGAACCAACCCAGTCTTTCGGTTTATGCCCAGCTTGGACCAGAGCATCTGAAAAAGGATATTGAAGACTGTCAAAATCTTGTCCTTGACCCTGCAAATACAGCAGAGCACGACGCACCTCCTTCGGAGTTACGACTAAGTCAACTGGAATTTAGTTCGCAAGATAGCTTTATTGCTTGGGGTTACAGCAAGGCATTAAAGTAA 1281 0.4145 MAGPSWLVDKSRIATKIRSASGACHPENVTWKSNPSKTCPNCQHAIDNSDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGVGNSKPHPFVDEFITTLEVDDGICYTHPQNLPGVMQDGNASHFFHRAVKAYNTGTRKRRKIHDQDFGDVRWHKTGKTKPVILNGVQKGFKKIMVLYMSSVGGGKAEKTNWVMHQYHLGTDEEENDGEFVVSKVFYQQQQVKLGDKNELDIPEATEATIIKVDPVTPKSVTPEPPYNERQYSDVDLGQETPAIPQPPQMDCLDEIQADCEEHAIDDLSMIETENNEETYDKEINADEGQKWWDSESQNLLDSQQLVEALSLCDDLLHSQSPERDDEHGEHKNQPSLSVYAQLGPEHLKKDIEDCQNLVLDPANTAEHDAPPSELRLSQLEFSSQDSFIAWGYSKALK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00965 426 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Car02g00965 426 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 420 - -
Car02g00965 426 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Car02g00965 426 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Car02g00965 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 420 IPR044799 GO:0003700
Car02g00965 426 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00965 Car-Chr2 16741492 16746146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00965 5 223 NAC Transcription Factor Family AT4G28500 53.333 4.64e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00965 NAM 1.8e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00965 02 16741492 16746146 Car02g00965 02 16741492 16746146 ECH