Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00957 ATGGCGTCAGAGAACGCTTCTCGATCGAGTTCTACGGCCGATTCCTACATTGGAAGCTTGATAAGTTTAACATCCAGGAGTGAGATCAGATACGAAGGAATCCTCTACAATATCAACACCGAAGAGTCCAGTATTGGTCTCAGAAACGTGCGATCTTTTGGAACAGAAGGAAGGAAGAAGGATGGTCCACAAGTTCCTCCAGGCGACAAGGTTTATGAGTATATACTTTTTCGTGGGAGTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCTGCCCATCCTACTCCACAAGTCAACAATGACCCGGCTATTATCCAGTCTCATTATCCTCACCAAGCTGCCACATCTACAAGTTTGCCTTCTGGTGTGAGTGGGTCTTTGACTGATCTCAGTTCTCATACTACACAGCCCGGACATCCTGGGTCAAGTTTTCAAGGTCCCTTACCTTTGTATCAACCTGGAGGTAGCATAGGGTCATGGGGAGCTTCTCCACCTGCTCCAAATGCTAATAGTGGTGGGCTTGCTATGCCAATGTATTGGCAAGGATATTATGGTGCCCCCTCAAATGGGCTTCCTCATTTGCACCAACAATCTTTGCTTCGACCGCCACCTGGTTTATCAATGCCTTCATCCATGCAGCAGCCTATGCAGTATCCCAATTATAGTCTCTCATTACCGGCTGTATCTTCTAATTTGCCGGAACTGCCATCATCTTTGCTACCTTTGAGTACAAGTACACCTAGTGTAACATCTTCATCTTTACCTATATCAAATTTTCCTCCTGCACCGTCTGCCTTGGCTCCTGCACCTTCTGCCTTGGCTCCTGCACCACCTTCTGCTTTGTCTCCTGCACCTTCTGCCCTGTCTCCTGCACCTTCTGCTACACTAGCTTCTGAAATATTTCCTGTTTCAGTAAATAGCAAAGCACCAAATGCGTCAACTTCAACTGTAGCACTAGCTGCTAGCTTACCATCCATGACTCAGTTGACCCATTCTGGTCCAGATCTAAATGCTGTACAGCAACCAATATCCAGCAAAACTAATACTGTTTCAAATTCAAGTTTACCATATCAAACTGTATCCCAGTTTTCACCTGCAATTGTTGGATCATCAAATTCCATCCGTACAGAGACATCAGGCCCTACTCTGGTAACTCCAGGTCAATTATTACAGTATGGACCAACTACAGTTTCTTCTGCTCAACCTTCACAAACACCTCATAAGGATGTTGAAGTTGTTCAAGTATCATCGACATCATCTCCTGAGCAATCCCTGACAGTTTCTACTGAAACTAAACCACCAATACTGCCATTGCCAGTAACTTCTGGGCCCAGTCACAGGCCTGGTGGAGGTCCTATGCAAAATCATCATCATGGCTATAGTTACAGAGGACGCGGAAGAGGAAGAGGAACCGGGGGTTTTCGCCCGGTCACAAAATTCACTGAGGATTTTGATTTCATGGCAATGAACGAGAAGTTCAAAAAAGATGAAGTATGGGGTCATCTTGGTAAGAGTAACAAATCTAATTCAGTAGATAAAGATAGGGAAGAAAATGCCTTTgatgaagattacagtcaagatgaagataatgacgaTTTATCAAATATTGAGGTTAATAAGTCTGTTTATAACAAGGATGATTTCTTTGACTCACTCTCGTCCAGTGTGCTTGATAATGCTTCACAGAATGGAAGAACTAGATATTCTGAACAAATTAAAATTGATACTGAGACGTTTGGTGATTTTGCAAGGTAccgtggtggtcggggtggccgtggtcctggccgtggTGGACGTACTCGAGGTGGTTATTATGGAAGAGGAGGAGGATATGGCTATTCTGGAAGAGGAGGGTATGGTTATTCTGGAAGAGGAGGAGGATATGGCTATTCTGAAAGAGGAAGGGGACGTGGCATGCCCCATCATAGTTCTTAG 1938 0.4247 MASENASRSSSTADSYIGSLISLTSRSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGPQVPPGDKVYEYILFRGSDIKDLQVKSSPPAHPTPQVNNDPAIIQSHYPHQAATSTSLPSGVSGSLTDLSSHTTQPGHPGSSFQGPLPLYQPGGSIGSWGASPPAPNANSGGLAMPMYWQGYYGAPSNGLPHLHQQSLLRPPPGLSMPSSMQQPMQYPNYSLSLPAVSSNLPELPSSLLPLSTSTPSVTSSSLPISNFPPAPSALAPAPSALAPAPPSALSPAPSALSPAPSATLASEIFPVSVNSKAPNASTSTVALAASLPSMTQLTHSGPDLNAVQQPISSKTNTVSNSSLPYQTVSQFSPAIVGSSNSIRTETSGPTLVTPGQLLQYGPTTVSSAQPSQTPHKDVEVVQVSSTSSPEQSLTVSTETKPPILPLPVTSGPSHRPGGGPMQNHHHGYSYRGRGRGRGTGGFRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSNKSNSVDKDREENAFDEDYSQDEDNDDLSNIEVNKSVYNKDDFFDSLSSSVLDNASQNGRTRYSEQIKIDTETFGDFARYRGGRGGRGPGRGGRTRGGYYGRGGGYGYSGRGGYGYSGRGGGYGYSERGRGRGMPHHSS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00957 645 CDD LSm14_N 13 87 IPR025609 -
Car02g00957 645 PANTHER PROTEIN DECAPPING 5-LIKE 5 257 - -
Car02g00957 645 PANTHER PROTEIN DECAPPING 5-LIKE 273 618 - -
Car02g00957 645 PANTHER SCD6 PROTEIN-RELATED 5 257 - -
Car02g00957 645 PANTHER SCD6 PROTEIN-RELATED 273 618 - -
Car02g00957 645 MobiDBLite consensus disorder prediction 271 286 - -
Car02g00957 645 SMART FDF_2 479 584 IPR019050 -
Car02g00957 645 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Car02g00957 645 MobiDBLite consensus disorder prediction 111 151 - -
Car02g00957 645 MobiDBLite consensus disorder prediction 85 104 - -
Car02g00957 645 ProSiteProfiles FFD box profile. 542 557 IPR025761 -
Car02g00957 645 MobiDBLite consensus disorder prediction 502 521 - -
Car02g00957 645 Gene3D - 7 91 - -
Car02g00957 645 MobiDBLite consensus disorder prediction 373 475 - -
Car02g00957 645 MobiDBLite consensus disorder prediction 586 645 - -
Car02g00957 645 ProSiteProfiles TFG box profile. 564 584 IPR025768 -
Car02g00957 645 MobiDBLite consensus disorder prediction 271 290 - -
Car02g00957 645 ProSiteProfiles DFDF domain profile. 473 509 IPR025762 -
Car02g00957 645 SMART LSM14_2 10 110 IPR025609 -
Car02g00957 645 MobiDBLite consensus disorder prediction 502 534 - -
Car02g00957 645 Pfam FDF domain 480 581 IPR019050 -
Car02g00957 645 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Car02g00957 645 MobiDBLite consensus disorder prediction 373 432 - -
Car02g00957 645 MobiDBLite consensus disorder prediction 111 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00957 Car-Chr2 16484104 16491437 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00957 02 16484104 16491437 Car02g00957 02 16484104 16491437 ECH