Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00955 ATGAGGGGTAAAAGAAGGAGGAAGTTACATCTTAGTAAGCTGTATTCATTTGCATGTGGCAGACAATCGTTGATGAAAGGAGCTGAACATTCACAGATTGGAGAGCGTGGATATTCATGGGTGGTATTGTGCAATGAAGAAGAGAATTCTTCTGAGGAAGGAATTAAGAACAAGTATGCAGATAATGCAGTGAGGTCTACAAAATATACTGTTGCTACATTTTTGCCTAAGTCATTGTTTGAACAGTTTAGGAGAGTTGCTAATTTCTATTTTTTGGTAACTGGTGTTATGTCATTCACAAAACTTGCTCCTTATACAGCTGTTAGTGCTATCCTTCCTCTTGTTATTGTTATTGGGGCTACAATGGTCAAAGAGGGCATCGAAGATATGCGTCGCAAAAGGCAGGATATTGAGGTGAATAATAGAAGAGTTAATGTGCATAAAGGAAATGGAACTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGACGTATAGTAAAGATAATGAAGGATGAATTCTTCCCTGCAGATCTTATACTTCTTTCATCAAGTTATGAGGATTCAGTCTGTTATGTTGAGACAATGAATTTGGATGGAGAGACAAATTTGAAGTTAAAACAAGGATTGGAAGTAACTTGTTCTTTACATGAGGATTTTGAGTTCAGTGATTTTAGAGCTTCAATCAAATGTGAAGATCCAAATGCAAATTTATATTCATTTGTCGGGAGTATGGAGTTTAAAGATCAACAATATCCCTTATCTCCTCAGCAACTTCTTTTAAGAGACTCAAAACTTCGTAATACGGACTACATATTCGGTGTTGTCGTCTTCACCGGTCAGGACACAAAAGTCATTCAAAATTCTACTGATCCACCTTCAAAGAGAAGCAAAGTGGAGAAGAAGATGGATAAGATTATCTACCTATTGTTTTGTATATTAATTTTTATGGCACTTGTTGGATCTATTTTCTTTGGAATTGCAACTAAAGATGACTTGGATGATGATGGTAGGGTGATGAAAAGATGGTATCTAAGACCAGATGATTCCACAGTTTTCTTTGATCCTAAAAGTGCTTTTGCAGCTTCTGTATTGCATTTTTTGACAGCATTAATGTTATATGGTTACTTCATTCCAATTTCATTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAAAGCATATTCATAAATCAAGATCTACATATGTACTACGACGAAGCAGATAAACCGGCCCATGCACGTACTTCAAACTTAAATGAGGAACTTGGACAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTCACTTGCAACTCAATGGAGTTCATTAAATGTTCCATTGCCGGGGTAGCTTATGGCCGTGGTGTTACCGAGGTCGAGAGATCCATGAGTAGCAGACATGATTCTCCTTTGATTAATGACATAAGGGATTCTCCCAATAGAAATCCACCCATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTGATGAGCCTTATGCAGATATTATCCAGAAGTTTTTTCGCTTGTTGGCAGTCTGTCATACAGCCATACCAGAAGTCGATGAAGTTGAAGGAAATGTGTCGTATGAAGCTGAATCTCCGGATGAAGCAGCATTTGTGATTGCAGCGCGAGAACTTGGTTTCGAATTCTATAAAAGAACTCAAGCTAGTTTATCCATGTATGAATTGGATCCAGTTTCTGGTGACAAAGTTGAAAGGATTTACACACTTCTGAATGTGTTAGAATTCGATAGCTCAAGGAAGCGAATGTCAGTGATCGTGAAAGACGAAGGGAGAATTTTGCTGCTGTGTAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTTCCAAGGATGGGAGGGAATATGAAGAGAAAACCTTGGAAGATGTTCGTGAATATTCTGATGCAGGGCTAAGAACCCTGATATTGGCGTATCGTGAACTCGACGACGAGCAATACAAGGAGTTTGATACTGAATTCTCAAAAGCGAAAAACTCAGTTAGTGCAGATCGGGAAACGTTGATAAATGAGGTAACAGATAAGATAGAGAGGGAGTTAATACTTCTTGGTGCCACTGCTGTAGAGGACAAGCTTCAAAATGGGGTTCCTGATTGCATCGACAAACTTGCACAAGCTGGAATTAAGATATGGGTTTTGACTGGTGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTGCTTAGAGAAGGAATGAAGCAGCTTATAATTCAGTTGGAGACTCCAGAAATTCATGCATTGGAGAAAGCTGGAGACAAGAGGGCTCTTGCAAAGGCTTCAAAGGAAAATATCAGGTATCAGATATCTGAAGGTGCTGAACAGCTTGCTGCCTCTAGAGGAACTTCTGAGCAAGCATTTGCTCTAATTATTGATGGAAAGTCACTTGCTTACGCTTTAGAGGACAATATGAAGGACATGTTTCTAGCTCTTGCAATTCGTTGTGCATCTGTTATCTGCTGCCGATCATCCCCAAAGCAGAAAGCGCTAGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATAGGAGTTGGAATCAGTGGCGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATCGCAATCGCGCAGTTCCGTTATTTAGAAAGATTACTTCTTGTACACGGACATTGGTGTTACCGGAGGATCTCATCAATGATATGCTACTTTTTCTACAAGAATATTACATTTGGATTTACTCTATTCTTGTATGAGGTGAATGCATCGTTCTCTGGACAAGCTGAATACAATGACTGGTTTTTGTCTCTATATAATGTCTTCTTTTCATCACTTCCTGTGATTGCTCTTGGGGTCTTTGACCAGGATGTATCTGCTCGGTACTGTCTGAAATTTCCTATATTATATCAAGAAGGTGTACAAAATGTCCTGTTTAGCTGGAGGAGGATATTAAGTTGGATGTTTAATGGCTTCATCAGTGCCATAATGATATTCTTCTTTTGCACAAAGGCAATGGAGGTTCAACCCTTTGATAAGGCGGGAAAAACTGCTGAGAGGGATATACTTGGAGCAACTATGTACACATGTATTGTTTGGGTAGTGAACTTGCAGATTGCACTTGCCATAAGTTACTTCACCTTGATTCAACACATTTTCATATGGGGAACCATTGCTCTTTGGTACTTTTTCCTCTTGGTTTACGGCGCAATATCTCCTGGGATTTCAACAATTGCTTACAAAGTCTTCATTGAAACTCTTGCACCATCTCCTTTTTATTGGATTGTCACCTTTTTTGTGGTGATCTCGACACTCATACCATACTTCTCTTACTCAGCACTCAAGATGCAGTTCTTTCCTTGTTATCATGACATGGTACAATGGATAAGGTATGAAGGGAAGACAAATGATCCTGAATTCTGCCATATGGTGCGGCAGCGATCTTTGCGGCCAACTACTGTCGGTTCCACAGCTCGCTTAGCAGCTAAGACTAACAGCATAAGACAAAATTCCACTAACCAAAGATAA 3588 0.3905 MRGKRRRKLHLSKLYSFACGRQSLMKGAEHSQIGERGYSWVVLCNEEENSSEEGIKNKYADNAVRSTKYTVATFLPKSLFEQFRRVANFYFLVTGVMSFTKLAPYTAVSAILPLVIVIGATMVKEGIEDMRRKRQDIEVNNRRVNVHKGNGTFEYTEWKNLKVGRIVKIMKDEFFPADLILLSSSYEDSVCYVETMNLDGETNLKLKQGLEVTCSLHEDFEFSDFRASIKCEDPNANLYSFVGSMEFKDQQYPLSPQQLLLRDSKLRNTDYIFGVVVFTGQDTKVIQNSTDPPSKRSKVEKKMDKIIYLLFCILIFMALVGSIFFGIATKDDLDDDGRVMKRWYLRPDDSTVFFDPKSAFAASVLHFLTALMLYGYFIPISLYVSIEIVKVLQSIFINQDLHMYYDEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERSMSSRHDSPLINDIRDSPNRNPPIKGFNFTDERIMNGNWVDEPYADIIQKFFRLLAVCHTAIPEVDEVEGNVSYEAESPDEAAFVIAARELGFEFYKRTQASLSMYELDPVSGDKVERIYTLLNVLEFDSSRKRMSVIVKDEGRILLLCKGADSVMFERLSKDGREYEEKTLEDVREYSDAGLRTLILAYRELDDEQYKEFDTEFSKAKNSVSADRETLINEVTDKIERELILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLREGMKQLIIQLETPEIHALEKAGDKRALAKASKENIRYQISEGAEQLAASRGTSEQAFALIIDGKSLAYALEDNMKDMFLALAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVNASFSGQAEYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPILYQEGVQNVLFSWRRILSWMFNGFISAIMIFFFCTKAMEVQPFDKAGKTAERDILGATMYTCIVWVVNLQIALAISYFTLIQHIFIWGTIALWYFFLLVYGAISPGISTIAYKVFIETLAPSPFYWIVTFFVVISTLIPYFSYSALKMQFFPCYHDMVQWIRYEGKTNDPEFCHMVRQRSLRPTTVGSTARLAAKTNSIRQNSTNQR 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00955 1195 Gene3D - 693 902 IPR023214 -
Car02g00955 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Car02g00955 1195 SFLD C1.7: P-type atpase like 412 913 - -
Car02g00955 1195 Gene3D - 543 673 IPR023299 GO:0000166
Car02g00955 1195 Pfam Cation transport ATPase (P-type) 532 624 - -
Car02g00955 1195 CDD P-type_ATPase_APLT_Dnf-like 61 1022 - -
Car02g00955 1195 Gene3D - 120 290 - -
Car02g00955 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1139 IPR023298 -
Car02g00955 1195 Pfam Phospholipid-translocating ATPase N-terminal 44 110 IPR032631 -
Car02g00955 1195 SUPERFAMILY Calcium ATPase, transduction domain A 144 287 IPR008250 -
Car02g00955 1195 SFLD p-type atpase 412 913 IPR044492 -
Car02g00955 1195 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 941 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00955 1195 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1189 - -
Car02g00955 1195 SUPERFAMILY HAD-like 418 906 IPR036412 -
Car02g00955 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Car02g00955 1195 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car02g00955 1195 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Car02g00955 1195 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Car02g00955 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1189 - -
Car02g00955 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 663 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00955 Car-Chr2 16422752 16428974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00955 9 1188 Primary Pumps ATPases AT1G68710 72.802 0.0 1835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00955 02 16422752 16428974 Car02g00955 02 16422752 16428974 ECH