Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00876 ATGAGCTTCTCTTCTCACTACATGGATGATGAATATGAGAAACTCTTCAGGAGAATGAACCCTCCTAGGGTTGTAATTGATAATGAAGCCTGCAAGAATGCCACTGTTATAAGGGTTGATAGTGCAAACAAACATGGAATACTTCTAGAAGTTGTTCAAATCCTCACTGATTTAAATCTCATCATTACTAAGGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTAACTGACCAAGATGGAAACAAGGTCACAGATGAAGCCATTTTGGATTACATTAGAAAGTCTCTCGGTCCGGAATCATGCTTTCCATCGCCTGGGAGATCTGTCGGTGTTAAACAAACAATGGATCACACTGCGATAGAGCTAATGGGAAGTGATAGACCAGGGTTACTCTCGGAAGTGAGTGCGGTTCTTACCAACCTCAAATGCAACATAGTGAATGCCGAAGTTTGGACACATAACATGCGCGCAGCCGCTGTAATGCATGTTAATGACGAGGAAACTGGTTCTGCTATAACTGATCCTCAGAGGCTTTCACTAATCAAGGAGCTTCTATGCAATGTGCTTGGTGGTGGAAATAGGAAAAGGGGTGCTAAAACAGTTGTCACTGATGATTCCACGCATACCGATAGAAGGCTTCATCAGATGATGTTTGCTGATAGAGATTACGAACGTGTCGATGATGATGACTTTGATGAGAAGCAAAGACCAAATGTTAATGTTGTTAATTGGTCTGATAAAGATTATTCTGTTGTTACCATTGAATCGAAGGATAGGCCGAAACTTCTTTTCGACACTGTTTGTACTTTGACAGATATGCAATATGTCGTTTTTCATGCAAATATTGATGCTGAGGGGCCACAAGCATATCAGGAATATTACATCAAGCATATAGATGGTTCACCTGTAAAATCAGATGCGGAAAGACAAAGAGTGATACAATGTCTTGAAGCTGCAATTGAGAGAAGAGTTTCTGAGGGTTTGAAGCTTGAAATCTGCACCACCGACAGGGTTGGACTATTATCTAATGTCACACGTATCTTTAGAGAGAATAGTCTCACTGTTACAAGGGCAGAAGTAACAACCAAAGGTGGAAAAGCTGTTAACACTTTCTATGTTCGTGGAGCTTCTGGTTGTGTTGTTGATTCTAAGACAATTGAATCCATAAGGCAAACAATTGGAAACACAATACTAAAAGTAAAGGGTAGTCCTGAATCTGTACCTCAAGATTCTCCTACAAGATCATCTATCTTTAGTGGACTTTTCAAGTCTAGATCATTTGTTAACTTTGGATTGGTTAAGTCTTACTCTTGA 1329 0.398 MSFSSHYMDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEAILDYIRKSLGPESCFPSPGRSVGVKQTMDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVNDEETGSAITDPQRLSLIKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFADRDYERVDDDDFDEKQRPNVNVVNWSDKDYSVVTIESKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLEICTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCVVDSKTIESIRQTIGNTILKVKGSPESVPQDSPTRSSIFSGLFKSRSFVNFGLVKSYS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00876 442 Gene3D - 333 407 - -
Car02g00876 442 ProSiteProfiles ACT domain profile. 36 115 IPR002912 -
Car02g00876 442 ProSiteProfiles ACT domain profile. 334 414 IPR002912 -
Car02g00876 442 CDD ACT_ACR_3 254 328 - -
Car02g00876 442 CDD ACT_ACR_2 123 196 - -
Car02g00876 442 ProSiteProfiles ACT domain profile. 124 211 IPR002912 -
Car02g00876 442 Gene3D - 119 191 - -
Car02g00876 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 440 IPR040217 -
Car02g00876 442 SUPERFAMILY ACT-like 330 399 IPR045865 -
Car02g00876 442 SUPERFAMILY ACT-like 31 99 IPR045865 -
Car02g00876 442 CDD ACT_ACR_1 34 104 - -
Car02g00876 442 Pfam ACT domain 35 95 IPR002912 -
Car02g00876 442 Pfam ACT domain 125 173 IPR002912 -
Car02g00876 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 2 440 - -
Car02g00876 442 SUPERFAMILY ACT-like 119 190 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00876 Car-Chr2 13351936 13354995 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00876 02 13351936 13354995 Car02g00876 02 13351936 13354995 ECH