Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car02g00815 | ATGTTCGGGTTTCGAAAAGCGCCACCACCAACAAACCCCGCATCATCGGGTTCAGATGCTGAACCCGATAAAAAGACAACCCTTACTCCAGACCGACGAACATCCTCAGAGCCGGTCCTTCCAATGCCAAAGTCAAAAGGAAACTACTTTGACGATGATGACGACGATGATTGGGGAAGAAAGCCTTCCTCAACTAAGCCTTCCTCAACTGCATCGTCGGCGGCATCAAAAGACAGGTACAAAACCGGTTTCCGAGATTCTGGAGGACTAGAGAACCAAAGTGTTCAGGAGCTGGAAAACTATGCTGTGTACAAATCTGAGGAGACAACAAATAGTGTTAATAATTGTTTGAGAATTGCTGAAGATATTAGACAAGATGCTACAAAGACACTTGACATGTTGCACCAGCAGGGTGATCAGATTACAAGGACTCACAATATGGTTGTTGACACTGAGAAAGATTTGAGTAGGGGTGAAAAACTCCTTAACAATCTTGGAGGCATGTTCTCTAAACCATGGAAGCCAAAGAAAACCAGGGATATACAAGGCCCTGTAATTACATCAGATAATTCATCCAAAAAGAATATAAAGAATAAGGAAGATAGGGAAAAGTTGGGGCTAGCTCCTTTGCCTAAGGGACGTTCTGCTCCTACCTCACCTCCTTCTGAATCAGCCAATGCCTATCAGAAAATAGATTATGAAAAAGCTAAACAAGATGATGCACTCTCAGATCTCAGTGATATATTGGGTGATTTGAAGGGTATGGCAATTAGTATGGGAACTGAACTAGACAGCCAAAACAAAGCTCTTGATCATCTTAGTGACGATGTTGATGAGCTAAACTCTCGAGTTAAAGGTGCCAATCAGCGTGCACGCAAATTAGTAGCAAAGTGA | 894 | 0.4284 | MFGFRKAPPPTNPASSGSDAEPDKKTTLTPDRRTSSEPVLPMPKSKGNYFDDDDDDDWGRKPSSTKPSSTASSAASKDRYKTGFRDSGGLENQSVQELENYAVYKSEETTNSVNNCLRIAEDIRQDATKTLDMLHQQGDQITRTHNMVVDTEKDLSRGEKLLNNLGGMFSKPWKPKKTRDIQGPVITSDNSSKKNIKNKEDREKLGLAPLPKGRSAPTSPPSESANAYQKIDYEKAKQDDALSDLSDILGDLKGMAISMGTELDSQNKALDHLSDDVDELNSRVKGANQRARKLVAK | 297 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car02g00815 | 297 | SUPERFAMILY | SNARE fusion complex | 225 | 294 | - | - | |
| Car02g00815 | 297 | PANTHER | SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATED | 1 | 297 | - | - | |
| Car02g00815 | 297 | CDD | SNARE_Qc | 235 | 293 | - | - | |
| Car02g00815 | 297 | Gene3D | - | 229 | 295 | - | - | |
| Car02g00815 | 297 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
| Car02g00815 | 297 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 100 | 164 | IPR044766 | GO:0005484|GO:0031201 | |
| Car02g00815 | 297 | MobiDBLite | consensus disorder prediction | 193 | 208 | - | - | |
| Car02g00815 | 297 | SUPERFAMILY | SNARE fusion complex | 93 | 164 | - | - | |
| Car02g00815 | 297 | MobiDBLite | consensus disorder prediction | 164 | 228 | - | - | |
| Car02g00815 | 297 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 1 | 297 | - | - | |
| Car02g00815 | 297 | MobiDBLite | consensus disorder prediction | 63 | 77 | - | - | |
| Car02g00815 | 297 | MobiDBLite | consensus disorder prediction | 47 | 62 | - | - | |
| Car02g00815 | 297 | SMART | tSNARE_6 | 98 | 165 | IPR000727 | - | |
| Car02g00815 | 297 | SMART | tSNARE_6 | 227 | 294 | IPR000727 | - | |
| Car02g00815 | 297 | Gene3D | - | 89 | 167 | - | - | |
| Car02g00815 | 297 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 232 | 294 | IPR000727 | - | |
| Car02g00815 | 297 | Coils | Coil | 263 | 297 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car02g00815 | Car-Chr2 | 11697334 | 11699456 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car02g00815 | 02 | 11697334 | 11699456 | Car02g00815 | 02 | 11697334 | 11699456 | ECH |