Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00812 ATGGTGAAGATTTGCTGCATTGGAGCTGGATATGTTGGTGGTCCAACAATGGCTGTGATTGCATTGAAGTGTCCTGATGTTGAGGTAGCTGTGGTTGATATCGCTGCTCCGCGAATCAATGCTTGGAACAGCGACCACCTCCCTATATATGAGCCTGGTCTTGATGATGTGGTGAAGGAGTGCAGAGGAAGGAACCTTTTCTTCAGCACCGATGTTGAGAAGCATGTTGCTGAGGCTGATATCGTCTTTGTTTCGGTGAACACACCTACGAAGACTCAGGGTCTTGGAGCTGGCAAAGCAGCTGATCTCACTTACTGGGAGAGTGCTGCTAGAATGATTGCTGATGTTTCGAAATCAGACAAAATCGTTGTTGAGAAATCGACCGTTCCGGTTAAAACTGCTGAGGCAATTGAGAGGATTCTGACTCACAATCGGAAAGGCATTAACTTCACAATTTTGTCTAACCCTGAGTTTCTTGCTGAGGGTACAGCTATCAAAGATTTGTTCAATCCGGATCGAGTTCTTATCGGAGGCCGGGAAACTCCTGAAGGTCAAAAGGCTATCCATACTCTGAGGGATGTTTATGCTCATTGGGTCCCTTTGGACAAAATCCTTTGCACCAATTTGTGGTCTGCTGAACTCTCAAAGCTCGCTGCGAATGCTTTCTTGGCACAGAGGATCTCCTCGGTGAATGCCATGTCTGCACTATGTGAGGCAACCGGTGCTGATGTCTCCCAGGTTTCCCACTCGATTGGCACTGACTCGAGAATCGGGCCAAAGTTCTTGAATGCTAGTGTTGGTTTTGGAGGATCGTGCTTTCAGAAGGATATTCTGAACTTGGTCTATATCTGTGAGTGCAATGGCCTTCCTGAAGTGGCTAACTACTGGAAACAGGTCATTAAGGTGAACGACTACCAGAAATCTCGGTTCGTGAACCGTGTTGTTTCATCGATGTTCAACACGGTGTCCGGCAAAAAGATTGCTGTTTTAGGGTTTGCTTTCAAGAAGGACACCGGTGACACAAGGGAGACACCCGCGATCGACGTATGA 1050 0.4724 MVKICCIGAGYVGGPTMAVIALKCPDVEVAVVDIAAPRINAWNSDHLPIYEPGLDDVVKECRGRNLFFSTDVEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFTILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGQKAIHTLRDVYAHWVPLDKILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00812 349 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 349 - -
Car02g00812 349 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Car02g00812 349 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 349 IPR017476 GO:0016616
Car02g00812 349 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Car02g00812 349 Gene3D - 209 240 - -
Car02g00812 349 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 349 IPR036220 -
Car02g00812 349 PIRSF UDPglc_DH_euk 1 349 IPR028356 GO:0003979
Car02g00812 349 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 349 IPR028356 GO:0003979
Car02g00812 349 PIRSF UDPglc_GDPman_dh 2 349 IPR017476 GO:0016616
Car02g00812 349 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Car02g00812 349 Gene3D - 241 349 - -
Car02g00812 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 200 IPR036291 -
Car02g00812 349 Gene3D - 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00812 Car-Chr2 11585485 11588254 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01850 06 18383844 18386824 Car02g00812 02 11585485 11588254 PCT