Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00757 ATGAAGCTTTTTGGGAGAACGATTTCTCTAACATGCAACACCGATGTGTCTACCAATGATTCTTCCTCTTTTCCTCGTGAAGATTTCTCTCATCATAGTCCTTATTCATCTTCATCTTCTCCACTTGAAATGAATTCTTCAACGGAACATCAAACAAAGAGACATAAGGAACCATCAAGGAAAGAACTTACCTCAGATGATGAGGCCTCACAACAAACCACAGAGGATTCAAAATCTCACACATCCTCATGCCTCATTGAGAACCCTAGAACTCCCTCGTCCGAAACCGAAACTTCTCAACAGAATGGAGAAAAAAGTGACATGTCACAAGACAAATCTCTCACGAAACCGGACAAAATTCAGCCATGTCCAAGATGCAGCAGCAACGACACCAAATTCTGCTACTACAACAACTACAACGTCAAACAGCCCCGACACTTCTGTAAGAACTGCCAGCGATATTGGACTGCTGGAGGAATAATGAGAAATATGCCTGTAGGCGCAGGACGGCGCAAGAACAAAATCTCTCATTTTTCGTCCGCTGACTCGAATTATCGTCAAGTGATTCCTCAAAGTACTGCTGTGTTAACCTTTGGCTCAGATTCTAATATGTCTTCAACTTTGCATGAAGAAAAAGTTAATAAGTGTTATCAAAATTTTCCTCCTCAATTTCCCTTCCAAAACCATCCATGGAACCCATCAATGATTCCTCATGCTGCATTTTACCAACAAAGCTATCCTGTTTCATTCTATCCCAATATAGCATATTATGGTGGTTTTTTACCACAATCATGGAGTGTTCAATCTATCTCAACTCAATCTTGTGAACCAAATTCACCTACTTCAGGGAAACACTCAAGAGATGGTGAAATTCTCTTTCACTCCAACTCAAAGAAAGAAAAACTTGGCTCAGAAAGTAATAATAATAGTAATAGTGTGTTGATTCCAAAGACACTTAGAATTGATGAGCCTGATGAAGCTGCAAAGAGTTCTTCTACATGGTCAAAACTAGGAATCAAGGCATTTGCATCAAAGGGTGGTGATAAGAACCATGTGGTTGAAACATCATCAATATTGCAAGCTAATCCTGCAGCTTTATCAAGGTCTCTTGTGTTCCATGAGAGGATTTGA 1131 0.3988 MKLFGRTISLTCNTDVSTNDSSSFPREDFSHHSPYSSSSSPLEMNSSTEHQTKRHKEPSRKELTSDDEASQQTTEDSKSHTSSCLIENPRTPSSETETSQQNGEKSDMSQDKSLTKPDKIQPCPRCSSNDTKFCYYNNYNVKQPRHFCKNCQRYWTAGGIMRNMPVGAGRRKNKISHFSSADSNYRQVIPQSTAVLTFGSDSNMSSTLHEEKVNKCYQNFPPQFPFQNHPWNPSMIPHAAFYQQSYPVSFYPNIAYYGGFLPQSWSVQSISTQSCEPNSPTSGKHSRDGEILFHSNSKKEKLGSESNNNSNSVLIPKTLRIDEPDEAAKSSSTWSKLGIKAFASKGGDKNHVVETSSILQANPAALSRSLVFHERI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00757 376 MobiDBLite consensus disorder prediction 302 316 - -
Car02g00757 376 PANTHER CYCLIC DOF FACTOR 2 196 375 IPR045174 GO:0003700|GO:0006355
Car02g00757 376 PANTHER CYCLIC DOF FACTOR 2 1 190 IPR045174 GO:0003700|GO:0006355
Car02g00757 376 MobiDBLite consensus disorder prediction 48 74 - -
Car02g00757 376 MobiDBLite consensus disorder prediction 7 47 - -
Car02g00757 376 MobiDBLite consensus disorder prediction 1 122 - -
Car02g00757 376 MobiDBLite consensus disorder prediction 297 317 - -
Car02g00757 376 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 196 375 - -
Car02g00757 376 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 190 - -
Car02g00757 376 MobiDBLite consensus disorder prediction 75 108 - -
Car02g00757 376 Pfam Dof domain, zinc finger 119 174 IPR003851 GO:0003677|GO:0006355
Car02g00757 376 ProSiteProfiles Zinc finger Dof-type profile. 121 175 IPR003851 GO:0003677|GO:0006355
Car02g00757 376 ProSitePatterns Zinc finger Dof-type signature. 123 159 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00757 Car-Chr2 10481616 10483893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00757 91 374 C2C2-Dof Transcription Factor Family AT5G39660 39.011 1.01e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car02g00757 zf-Dof 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00757 - - mtr:MTR_5g041530 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00757 02 10481616 10483893 Car07g00937 07 8286664 8288715 PCT