Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00371 ATGCGAATGAGTTGTAATGGATGTAGGGTTTTAAGAAAAGGGTGTAGTGAAGATTGTATTATAAGACCATGTTTGGAGTGGATCAAGTGTCCTCAATCACAAGCTAATGCAACTGTTTTTCTTGCTAAGTTCTATGGTCGTGCTGGTCTCATCAATCTTATCAATTCTGGCCCTCAAAATCTTCGTCCAGCAATTTTTCGTTCATTGCTATATGAAGCTTGTGGGAGAATCGCGAACCCGATTTATGGGTCAGTTGGTTTTTTATGGTCAGGTAGCTGGCAGCTCTGTCAAGCCGCCGTTGACTCTGTTTTAAAGGGCGAGCCGATCAAGCCAATAACTTCAGAAGCCGCAGCAAATGAGCGGGCCCCACCGTTAATGGCATACGACATACGCCATGTGGCTAAGGACGATAACTTGAAGGAGACTCAGCAAGCCAAGACTCGGTCCCGGTTTAAACGAACCATGAAGCCAAAGGCAAGCAAGAAAACCGGGTCCGGTTTGGTTGAGGAGAAGAATGAGTCTGAGTCGTTGTTGAGCTATCATTGTAAGGATAATGAGAGTGGGGTTTCGGTTGAAACTTCGATCCTTTTTCACAACGAACCGGAGTCTAAACCTAAGATGAGTGACCGAGCCGACGAAAATGTGACCGATGAGGTTGGTTTGGAGTTGAGGCTTGGAATAGAACCGGTTTCACGTGAGGAACATGTGGTTCCCATAAAGAAGAGAAAAATTGAGTTGAAAGATTGGGGTGTCTCGTGTAAGGTTGAACTTGGGCTTGAGCTTGTGGCTTGA 792 0.4558 MRMSCNGCRVLRKGCSEDCIIRPCLEWIKCPQSQANATVFLAKFYGRAGLINLINSGPQNLRPAIFRSLLYEACGRIANPIYGSVGFLWSGSWQLCQAAVDSVLKGEPIKPITSEAAANERAPPLMAYDIRHVAKDDNLKETQQAKTRSRFKRTMKPKASKKTGSGLVEEKNESESLLSYHCKDNESGVSVETSILFHNEPESKPKMSDRADENVTDEVGLELRLGIEPVSREEHVVPIKKRKIELKDWGVSCKVELGLELVA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00371 263 MobiDBLite consensus disorder prediction 142 170 - -
Car02g00371 263 PIRSF AS2 1 262 IPR017414 -
Car02g00371 263 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Car02g00371 263 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 260 - -
Car02g00371 263 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Car02g00371 263 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00371 Car-Chr2 4131885 4133565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00371 1 259 AS2 family AT3G02550 53.309 4.24e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g00371 LOB 3.8e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00371 02 4131885 4133565 Car02g00371 02 4131885 4133565 ECH
Car02g00371 02 4131885 4133565 Car03g00062 03 1539217 1542205 ECH
Car04g01568 04 16130874 16131946 Car02g00371 02 4131885 4133565 ECH