Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02911 ATGTCCAAATCTACAGGTTCAAAAAATAGTTCCAACCCATCAACTAAAAATCACGGTGACAAATTCCTTGATGGACTAATCCCTTCTGGATTTGATAAAAAATCATGCTTAAGCCGATTCGAGCTCTACTTATATCGCAAATCATCGCCTCATAAACCTTCTCCATATCTCATATCCAAACTTCGAAGTTATGAAGATCTTCACAGAAAATGTGGACCTCATACTAAAGCTTACAAGAGAACCATGGTAAAGCTCAAAAAATTCAAATCCATAAATGTTACAACTAGTGGATCGTGTAAGTACATAATTTGGACACATGCTGATGGCTTAGGGAACAGAATGGTGAGCATGGTTTCATCATTTCTTTATGCAATCCTCACCGATAGAGTCCTATTGGTAGAGTTTCAAGATGACATGGTTGACTTATTTTGTGAACCATTCCCTAATTCATCATGGTTACTACCTAAAGATTTTCCTTTTAGTAACAATAATAGAAATCATATTGAAACATATCAAAATATATTGGAAAAGGATAGGGAAAATCATTCAAAGGAGTTACCATCAGTTATACAGCTCAAGATACTGCCCACAAATAATAATCATGAAAGGTTTTTCTCTTGTGATCATAGTCAACATCTTCTAATTAAAGTACCCATCTTGATTTTTTTATCAGATCAATATTTTGTACCTTCTCTTTTTATGGTTCCATCTTTCACCCAAGAGCTTAGCAAAATGTTCCCAAATAAAGAAACTGTTTTTCATCATTTGGGAAGATTCTATCAAGCATATTTAGCTAAGGCAGATGAAAAGATTGGACTTCAAATAAGAGTATTTAATCCTGATCTCACTTCACATCAAACTGTTCTGAATCAAGTTTTGAATTGCACTCAAAAGCATAAGATTCTACCCGGTTTTGCCGTGGAAAATTCAGAAGACTCTCCAGAGAAAAATGAGCGTTTGAAATCTGTTTTGGTTGCATCTTTATATCCAGAGTATGGTGAGAATCTCAGGACTATGTATTTGAATAAAGCAACTGTTACAGGGGAAATCCTAGGGGTTTATCAACCAAGTCATGAAGGGCATCAAAAGTTTGGCGATAACTTGCACAACAAGAAAGCATTGACAGAAATATATCTATTAAGTTTATGTGATGATTTGGTGACTAGTGCTCTATCAACTTTTGGGTATGTGGCTCAGAGTTTGGGAGGCATAACCCCAAGGATTCTTTACAAATTACAAGGAAATAATGTACCAGATTCACCTTGTGTACAAGATGTGAGTATGGAGCCTTGTTTTCATTTACCTCCTAAACATGATTGCATGGAAAAGCCTATTGATGATGATATTGGTACAACTTTTCCTTACATGAGGAGGTGTTTGGATTATAAATGGGGTATAAAGTTGGTCAACGATCTTCAGTAG 1422 0.3537 MSKSTGSKNSSNPSTKNHGDKFLDGLIPSGFDKKSCLSRFELYLYRKSSPHKPSPYLISKLRSYEDLHRKCGPHTKAYKRTMVKLKKFKSINVTTSGSCKYIIWTHADGLGNRMVSMVSSFLYAILTDRVLLVEFQDDMVDLFCEPFPNSSWLLPKDFPFSNNNRNHIETYQNILEKDRENHSKELPSVIQLKILPTNNNHERFFSCDHSQHLLIKVPILIFLSDQYFVPSLFMVPSFTQELSKMFPNKETVFHHLGRFYQAYLAKADEKIGLQIRVFNPDLTSHQTVLNQVLNCTQKHKILPGFAVENSEDSPEKNERLKSVLVASLYPEYGENLRTMYLNKATVTGEILGVYQPSHEGHQKFGDNLHNKKALTEIYLLSLCDDLVTSALSTFGYVAQSLGGITPRILYKLQGNNVPDSPCVQDVSMEPCFHLPPKHDCMEKPIDDDIGTTFPYMRRCLDYKWGIKLVNDLQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02911 473 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 4 472 - -
Car01g02911 473 Gene3D - 96 174 - -
Car01g02911 473 PANTHER FUCOSYLTRANSFERASE 2-RELATED 4 472 IPR004938 GO:0008107|GO:0016020|GO:0042546
Car01g02911 473 MobiDBLite consensus disorder prediction 1 18 - -
Car01g02911 473 MobiDBLite consensus disorder prediction 1 21 - -
Car01g02911 473 Pfam Xyloglucan fucosyltransferase 4 440 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02911 Car-Chr1 54107440 54109154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02911 15 469 Xyloglucan Fucosyltransferase1 AT2G03220 48.312 2.96e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02911 K13681 - gmx:100809919 533.872