Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02475 ATGGATTCTTCATCTGGACAAACTCAGCAAATGTCTAGCAATTCATCACTGGAAAACATGTTAGGTTGCTCAAAAGAAGAACAAGACACAAAAGCAAAACCTCAACCAGAACAAGCTCTGAAATGTCCAAGATGTGATTCAACCAACACCAAATTCTGTTACTACAACAACTACAGTCTTACACAGCCAAGATACTTCTGCAAATCTTGCAGAAGATATTGGACCAAAGGTGGAACATTAAGGAATGTTCCAGTTGGAGGTGGATGCAGAAAAAACAAAAGATCATCATCAACATCAAAAAGGGTACAAGATCAATCATTCACACCTAATCTAATAAACCCATTTAATAACTTCCCTCATTCATCTTATGATCATAATTCCAATGATTTCACATTAGCATTAGCTAGGCTTCAAAAACAATCATGTGGGCAAATGGGTCATTTTGATGATAATGATGTTTCAATTTTGGGAAATCCAAATTCAGCCACAAGCTCATTTAATGATGTTATTGGCAACCATTCAACCACAAACAATGGATTATTTGATGCAATTAGAAGTGGGTTATTCCTTGGAAGTGGAATACaatataattataataataataatGTTCAGAATTTGTATGGTGTTTATGGAAATGGAGACAATATGGAAGTAAATAGTGGAAACAACAATAGCAATGTTTGTGGGGTTGGTGAAGAAATGATGTTTCCTTATGAACAAGAAATCAGGGGTGCAATAAATGTGAAGCAAGAATTGTGCAGTGGTAGAGAACAAAGTGAAAGTAAAGTTTTTGGTGGTTTTCCTTGGCAGTTAAATGGTGGACCAAACATGGGTGAAATTGAATCAGTAAGAGGAAATTGGAATAATGGTTTCACTTCTAATTGGCAAGGGGTTCTTCATAGTCCACTAATGTAG 915 0.3541 MDSSSGQTQQMSSNSSLENMLGCSKEEQDTKAKPQPEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSTSKRVQDQSFTPNLINPFNNFPHSSYDHNSNDFTLALARLQKQSCGQMGHFDDNDVSILGNPNSATSSFNDVIGNHSTTNNGLFDAIRSGLFLGSGIQYNYNNNNVQNLYGVYGNGDNMEVNSGNNNSNVCGVGEEMMFPYEQEIRGAINVKQELCSGREQSESKVFGGFPWQLNGGPNMGEIESVRGNWNNGFTSNWQGVLHSPLM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02475 304 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 8 303 - -
Car01g02475 304 MobiDBLite consensus disorder prediction 1 41 - -
Car01g02475 304 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Car01g02475 304 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Car01g02475 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 303 IPR045174 GO:0003700|GO:0006355
Car01g02475 304 MobiDBLite consensus disorder prediction 1 23 - -
Car01g02475 304 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02475 Car-Chr1 50489302 50491145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02475 38 304 C2C2-Dof Transcription Factor Family AT2G28510 40.780 4.45e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car01g02475 zf-Dof 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02475 - - gmx:778106 323.168