Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01893 ATGTCAGAGATTGTTGTTGTAGAACCAATATTTCATCATGAAATTCATTTTGAGCAAGGAGAAACATCAACAGCTAGACAACAACATCATGATTATGATGATGCTATGTCTATTACCAATGTTAGCAGCAATAGTGTTGATTATGCAGTTCAACAAGGACCCTTTGACAGTGAAAGATTGCCTACTGTGTTTGCTTCTGAAATTCAAAGGTTCCTTCGTGTTGCTAACTTGCTTGAAAGAGAGGAACCTCGTGTTGCATATCTTTGTCGCGTTCACGCCTTTGTAATTGCACACAACTTGGACAAAAATTCTAGTGGAAGAGGTGTTAGACAATTCAAAACTTCACTCCTTCATAGACTTGAACAGGATGAGAATGCTACAAAAAGAGGTGGAATAGGTGATATTCGTGAACTTAAGCGTGTTTACCATGTCTACAGAGATTATTTTACTAGAAATGATAAAGCATTTGATCTAGAACAAAGTCGAAGGGCGAAATTGATTAGTGCAAGAACCATTGCTTCTGTTCTGTTTGAGGTGCTTAAAACGGTTACGTACACACCTAATAATCAGGCCCTTATTGAAGGAAATGCAATCCACAAGAAAACTGAGTTTAACATTCTTCCACTTGAGCAAGGGGGAATTCAGCATGCAATCATGCAGCAGAATGAGATTAAGGCCGCCATTGCAGTTATTCGCAACGTTCGAGGTTTACCACCGGCCCAAGATTTCAAGAAACATGGAGCCTTTGTAGACCTGTTTGATTTTCTTCAGCATTGTTTTGGATTCCAGGAAGCCAATGTAGCAAACCAAAGGGAACATCTGATTTTACTTCTAGCCAACGTGCAAACAAGGCACACTCACAACCAGACATCAATTTTGAAGTTAGGAGAAGGAGGTGTGGATGAATTGATGAGAAAGTTCTTCAAAAATTATACAAACTGGTGCAAGTTTTTGGGAAGAAAAAGCAATATCCGCTTACCTTTTGTGAAACAGGAAGCACAACAATATAAAATTTTATATATTGGTCTTTACCTGCTCATATGGGGGGAGGCAGCTAATTTAAGGTTCATGCCAGAATGTCTCTGCTATATCTTTCACCATATGGTATATGAATTGCATGGAGTTTTAAGTGGTGCTATCAGCCTAACAACATGGGAAAAGGTCATGCCAGCATATGGAGGAGAACCAGAATCTTTCCTTAAGAATGTTGTCACACCTATATACAATGTTATAAAAGAGGAAGTTGAAAATAGCAAAGGTGGTACAGCTGACCATTCTGCATGGAGAAACTATGATGATCTCAACGAATACTTCTGGTCTCCTGATTGTTTCGGAATCGGTTGGCCAATGCATACGGAGGACCATGATTTTTTCTTTGTAAAATCCAAAGTTAAACCTGATTTCAAGAAGGCTCGTGTTGTATCACCTGATATAATGAaagaaaagaagaaaaagaagaagaaagaaaagaagGAAGAAACTGTGGAGGAAAATGAGGAAAAAAATGAAAAGCAATGGCTTGGAAAGACCAATTTTGTTGAAATTCGTTCATTTTGGCAAATTTTTAGAAGCTTTGATAGAATGTGGAGTTTTTATATTCTATCCCTTCAGGCCATAATAATCATTGCTTGTCATGACTTGGGATCTCCACTTCAGTTGTTTGATGCCACAGTATTTGAGGACATCATCAGCATCTTTATTACCTCAGCAATTCTTAAACTTATTCAAGCAATTTCAGACATCGTATTTACGTGGAAAGCAAGATACACCATGGAACATTCACAAAAAGTGAAACATGTGGTGAAGTTGGTCTTTGCCATTATATGGAATATTATTCTTCCTGTGTGCTATGCTAATTCGAGAAGAAAATATACTTGTTATTCCACCAAGTATGGAAGTCTGGTTGAGGAATGGTGCTTTACATCTTATATGGTTGCTTCTGCAATATACTTGACAAGTAATGCAGCTGAAGTTGTGTTATTTTTTGTTCCTGCTATGGGAAAATATATTGAGGTCTCTAATAACAAGATATGCAGAGTTTTAGCTTGGTGGATTCAGCCAAGAATCTATGTTGGAAGAGGAATGCAAGAAGACCAAGTTTCTGTTATGAAGTACACATTGTTTTGGATATTGGTGTTATCGTGTAAATTTGTGTTCAGCTATAGTTTTGAGATAAAACCACTCATAGAACCAACTAGACAGATCATGAAAATTGGAGTAAGAAAGTATGAATGGCATGAGCTTTTTCCAAAAGTCAAATATAATGCTGGTGCAATTGTGGCTGTATGGAGCCCTGTAGTAATGGTATATTTTATGGACACACAAATTTGGTATTCAGTTTTCTGTACAATAGTTGGTGGAGTTTATGGAATTTTGCATCACCTTGGTGAGATAAGGACACAAGGAATGCTTAGAAGTAGATTTGACAACTTGCCAGCAGCATTTGATGTCTGTCTGAATCCTCCATCTTCAAAACGTGGTAAAAAGAGAAGAAAAGGTTTCCTCAGCAACATATTTCAAAAGCTTCCTGGTGAAAAAAATGCTATTGCCAAATTTGTGGTAGTATGGAATCAAATTATAAGCCATCTTCGTCTCGAAGACTTAATTAGTAACAGAGAGATGGATTTAATGATGATGCCTATGTCGACAGAATTGTTTTCTCGCAAGGTTCTTTGGCCGATTTTCCTCTTGGCAAGCAAGTTTTCTACAGCTTTGACCATTGCTAAAGATTTTAAGGGAAAGGAAGAAATTCTTGTAAAAAAAATTACAAAAGATAAATACATGTTCTATGCTGTAAGAGAGTGCTACCAGTCACTGAAATATGTTCTTGAGATTCTTATTATCGGTAGCCAGGAAAAAAGGATTATACGTGATATACTAAGCGAAATTGAAAAAAGTATCGAAGAAACAACTCTTCTTAAGAACTTCAACATGAAAGTTCTCCCAGCTCTACATGTTAAGGTCATTGAGCTAGCTGAACTTCTGATTGAGGGAGATAAGGAAAATCGGCACAAAGTTGCGAAAGCTTTACTTGATATGTTTGAACTGGTAACAAATGAAATGATGGCTGATTCAAGAACATTGGATACATTCCACTTTCCCCAACAAAATGAGGGTGGCTTTGTCTATTTTAGAGATGATGATCAATTATTTTCCAATGAAGAAATGAATAGTGAATCCTTTCCATTTTCCAATGAAAATTCTGTCCATTTTCCTTTGTCAGAAGACTCTATGGAAAAGGTCAAGAGATTTCATTTATTAGTTACCGTCAAAGAGACTGCAATGGACATACCTGCAAACTTAGACGCTCGTAGGCGCATATCATTCTTTGCTACTTCTCTATTTACAGATATGCCAGATGCTCCAAAAGTGCATAGTATGCTGCCATTTAGTGTTATAACCCCACACTACATGGAGGACATCAATTTTTCGCTGAAGGAGCTTGGTTCCGAAAAGGAGCAGGACTCCATCATCTTTTACATGCAAAAGATATATCCAGATGAATGGACAAACTTTTTGGAACGTATGTGTTGCGAAAACCGCAAGAGTGTAGAAGATGAACACGGGACAGAAGAGCTTAGATTGTGGGCTTCATTCAGAGGACAGACACTAGGCAGAACAGTTAGAGGGATGATGTACTACAGAGAAGCCTTAAAATTGCAAGCATTTCTTGACATGGCTGAAGATGAAGATATTCTTGAAGGTTATGAGATTGCTGAAAAGGGTAACCGCGCATTATTTGCGCGTCTCGAAGCACTAGCAGACATGAAATACACCTATGTCATTTCCTGTCAATCATTTGCATTGCAAAAGGCGATGAACGATCCTCGTTATAAAGATACAATTGACTTAATGACAAGGTATCCGTCTCTCCGTGTCGCTTATGTTGAGGAAAAGGAGGAGATTGTACAGCGTAGACCTCACAAAGAATACTATTCTAAGTTGGTTAAAGTTGTTAATGGTTTTGAGCAGACAATATATCAAATAAAACTTCCAGGTCCACCACAGCTTGGAGAAGGGAAGCCTGAAAATCAAAACAATGCAATAATATTCACTCGTGGCGAGGCCCTCCAAACAATTGATATGAACCAAGATAATTACTTGGAAGAAGCTCTAAAAATGAGAAACCTTCTCCAAGAATTTCTTAAGCGCCAAGGAAGGAGGCCTCCTACAATACTTGGTTTAAGGGAACATATTTTCACGGGAAGTGTGTCTTCTTTGGCATGGTTCATGTCATATCAAGAGACCAGTTTTGTCACAATTGGTCAAAGGCTTCTTGCTAATCCTCTCAGGGTGCGGTTTCACTATGGCCATCCAGATGTATTTGACAGAGTTTTTCATATTACAAGAGGAGGAATAAGCAAAGCATCTAAAACAATTAATTTGAGTGAAGATGTTTTTGCTGGATTTAATTCTACTTTAAGAAGGGGATGTATTTCCTACCATGAATACTTGCAAATTGGCAAAGGTCGCGATGTCGGTCTAAACCAGATATCAAAATTTGAAGCTAAGGTAGCAAATGGAAACAGTGAGCAAACTATAAGCCGTGACATCTTTCGCCTTGGACGCCAATTCGATTTTTTCAGGATGCTATCTTGTTATTTCACTACTATTGGATTTTACTTCAGCAGTTTGATTTCAGTAGTAGGAATATATGTATTTCTCTATGGTCAGTTATACCTTGTGCTTAGTGGCTTAGAGAAAGCACTCATCATTGAAGCTAGAATCAAGAATGTACAGTCTTTGGAAACAGCTCTTGCTTCTCAATCATTCATACAACTTGGACTTCTAACAGGCTTACCAATGATGATGGAAATAGGCCTTGAAAGAGGTTTCCTCACAGCCCTTAAAGACTTTGTCCTAATGCAGTTGCAGCTTGCTGCTGTTTTCTTCACATTCTCCCTTGGAACAAAAACACATTACTATGGCAGAACAATTTTGCACGGCGGCGCAAAGTATAGACCGACCGGACGCAAAGTTGTCTTCCACGCTAGCTTCACTGAAAACTACAGATTATATTCGAGAAGCCATTTTGTAAAGGCGTTCGAGCTAATGCTTCTTTTGATTGTTTATAACATGTTCAGGAAATCTTATCAAACTCATCTTCGTCGATCAAGTCTCGGTTCGAGGATCGCCGAAATATTGCTTTCTCTTCGTTTCTTCATATATCAGTATGGTCTAGTCTATCACCTTGACATTACTCAGAACAGCAAAAACTTGTTGGTTTATGTCTATTCATGGTTTGTGATTTTTGGAATATTCCTCTTGGTTAAGGTTGTTAACTTAGGAAGGAAACTACTTAGTGATAATTATCAACTTAGATTCAGAATTTTCAAAGCATCCCTGTTTGTGGCTGTTCTTTCCCTCATCATTACTCTTTCAATCATATGTGAACTTTCATTGACAGACCTTTTTACTTGTTGTCTGGCATTCATTCCAACTGCATGGGGACTAATACAGATTGCACAAGCATCAAGGCCAAAAATAGAGCATACAGGATTATGGGACTTCACACGTGCACTTGCAAGAGAATTTGATTATGGAATGGGAATAATACTTTTTGGACCTATAGCTATTTTGGCATGGCTACCAATCATCAAAGCCTTCCATGCTCGTATCCTTTTCAATGAGGCTTTCAAAAGACACTTGCAAATTCAACCACTTCTCTCAGCTAAGAAGAAGAAGCATAGACCTTAA 5697 0.3781 MSEIVVVEPIFHHEIHFEQGETSTARQQHHDYDDAMSITNVSSNSVDYAVQQGPFDSERLPTVFASEIQRFLRVANLLEREEPRVAYLCRVHAFVIAHNLDKNSSGRGVRQFKTSLLHRLEQDENATKRGGIGDIRELKRVYHVYRDYFTRNDKAFDLEQSRRAKLISARTIASVLFEVLKTVTYTPNNQALIEGNAIHKKTEFNILPLEQGGIQHAIMQQNEIKAAIAVIRNVRGLPPAQDFKKHGAFVDLFDFLQHCFGFQEANVANQREHLILLLANVQTRHTHNQTSILKLGEGGVDELMRKFFKNYTNWCKFLGRKSNIRLPFVKQEAQQYKILYIGLYLLIWGEAANLRFMPECLCYIFHHMVYELHGVLSGAISLTTWEKVMPAYGGEPESFLKNVVTPIYNVIKEEVENSKGGTADHSAWRNYDDLNEYFWSPDCFGIGWPMHTEDHDFFFVKSKVKPDFKKARVVSPDIMKEKKKKKKKEKKEETVEENEEKNEKQWLGKTNFVEIRSFWQIFRSFDRMWSFYILSLQAIIIIACHDLGSPLQLFDATVFEDIISIFITSAILKLIQAISDIVFTWKARYTMEHSQKVKHVVKLVFAIIWNIILPVCYANSRRKYTCYSTKYGSLVEEWCFTSYMVASAIYLTSNAAEVVLFFVPAMGKYIEVSNNKICRVLAWWIQPRIYVGRGMQEDQVSVMKYTLFWILVLSCKFVFSYSFEIKPLIEPTRQIMKIGVRKYEWHELFPKVKYNAGAIVAVWSPVVMVYFMDTQIWYSVFCTIVGGVYGILHHLGEIRTQGMLRSRFDNLPAAFDVCLNPPSSKRGKKRRKGFLSNIFQKLPGEKNAIAKFVVVWNQIISHLRLEDLISNREMDLMMMPMSTELFSRKVLWPIFLLASKFSTALTIAKDFKGKEEILVKKITKDKYMFYAVRECYQSLKYVLEILIIGSQEKRIIRDILSEIEKSIEETTLLKNFNMKVLPALHVKVIELAELLIEGDKENRHKVAKALLDMFELVTNEMMADSRTLDTFHFPQQNEGGFVYFRDDDQLFSNEEMNSESFPFSNENSVHFPLSEDSMEKVKRFHLLVTVKETAMDIPANLDARRRISFFATSLFTDMPDAPKVHSMLPFSVITPHYMEDINFSLKELGSEKEQDSIIFYMQKIYPDEWTNFLERMCCENRKSVEDEHGTEELRLWASFRGQTLGRTVRGMMYYREALKLQAFLDMAEDEDILEGYEIAEKGNRALFARLEALADMKYTYVISCQSFALQKAMNDPRYKDTIDLMTRYPSLRVAYVEEKEEIVQRRPHKEYYSKLVKVVNGFEQTIYQIKLPGPPQLGEGKPENQNNAIIFTRGEALQTIDMNQDNYLEEALKMRNLLQEFLKRQGRRPPTILGLREHIFTGSVSSLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRVFHITRGGISKASKTINLSEDVFAGFNSTLRRGCISYHEYLQIGKGRDVGLNQISKFEAKVANGNSEQTISRDIFRLGRQFDFFRMLSCYFTTIGFYFSSLISVVGIYVFLYGQLYLVLSGLEKALIIEARIKNVQSLETALASQSFIQLGLLTGLPMMMEIGLERGFLTALKDFVLMQLQLAAVFFTFSLGTKTHYYGRTILHGGAKYRPTGRKVVFHASFTENYRLYSRSHFVKAFELMLLLIVYNMFRKSYQTHLRRSSLGSRIAEILLSLRFFIYQYGLVYHLDITQNSKNLLVYVYSWFVIFGIFLLVKVVNLGRKLLSDNYQLRFRIFKASLFVAVLSLIITLSIICELSLTDLFTCCLAFIPTAWGLIQIAQASRPKIEHTGLWDFTRALAREFDYGMGIILFGPIAILAWLPIIKAFHARILFNEAFKRHLQIQPLLSAKKKKHRP 1898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01893 1898 SMART FKS1_dom1_2 335 451 IPR026899 -
Car01g01893 1898 Pfam 1,3-beta-glucan synthase component 1097 1186 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Car01g01893 1898 Pfam 1,3-beta-glucan synthase component 1187 1694 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Car01g01893 1898 PANTHER CALLOSE SYNTHASE 8-RELATED 48 1701 - -
Car01g01893 1898 Coils Coil 478 505 - -
Car01g01893 1898 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 337 448 IPR026899 -
Car01g01893 1898 Gene3D - 54 227 IPR023175 -
Car01g01893 1898 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1699 1895 - -
Car01g01893 1898 PANTHER CALLOSE SYNTHASE 8-RELATED 1699 1895 - -
Car01g01893 1898 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 48 1701 - -
Car01g01893 1898 Pfam Vta1 like 67 190 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01893 Car-Chr1 43227369 43248520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01893 1699 1894 Glycosyltransferase AT3G14570 63.776 2.18e-68 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01893 01 43227369 43248520 Car01g01893 01 43227369 43248520 ECH