Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01881 ATGGTGTTATTATCCAAATCAACATCAGAACAATTTTCCTATGTTAGGAACAACATGCCAACCACATTTTCCTCAACAATTCCTCTTGTTGACCTCTCAAAACCAGATGCAAAAAATCTCATAGTGAAGGCTTGTGAAGATTTTGGATTTTTCAAAGTCATAAACCATGGAATCCCTATAGAAGCTATGTCTCAATTGGAATTTGAGGCCTTCAAGTTTTTCTCTTTGCCACTCAAAGAGAAAGAAAAAGGAGGTCCTCCTAATCCATTTGGGTATGGTAACAAAAATATTGGACTCAATCGTGATGTTGGTTGGGTTGAATATCTTCTTCTTACAACCAATGAAGAACCCAATTTCTCTATTTATGGCAAACATACAGACAAATTTAGGTGTTTGTTGAATGATTATAAGATTGCTATGAGGAATATGGCATGTGAGATACTTGATTTAATGGCAGAAGGGTTAAAAATTCAACCAAAGAATGTGTTTAGCAAACTTGTGATGGATAAACAGAGTGACTCTGCTTTTAGGGTGAATCATTACCCTGCTTGCCCTGAATTAGCTTTGAATGGTGAGAATTTAATTGGGTTTGGAGAACACACTGACCCTCAAATCATTTCACTTTTGAGATCAAACAACACTTCTGGTTTCCAAATTTCTCTTAGAGATGGAAGATGGATTTCAGTGCCACCTGATCATAGCTCCTTCTTCATCAATGTTGGTGATTCTCTTCAGGTTATGACTAATGGGAGGTTCAAAAGTGTGAGACACAGAGTTTTGGCAAATGGGATCAACCCAAGGCTCTCAATGATTTACTTTGGTGGACCACCCCTTAGTGAGAAAATAGCACCATTGCCTTCACTCATGAAAGGAAAAGAAAGTTTGTATAAAGAATTTACATGGTTTGAGTATAAGAATTCAACCTATGGTTCAAGATTGGCTGACAATAGACTTGGACACTATGAAAGGATTGCTGCCTCCTAA 984 0.373 MVLLSKSTSEQFSYVRNNMPTTFSSTIPLVDLSKPDAKNLIVKACEDFGFFKVINHGIPIEAMSQLEFEAFKFFSLPLKEKEKGGPPNPFGYGNKNIGLNRDVGWVEYLLLTTNEEPNFSIYGKHTDKFRCLLNDYKIAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDSAFRVNHYPACPELALNGENLIGFGEHTDPQIISLLRSNNTSGFQISLRDGRWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGINPRLSMIYFGGPPLSEKIAPLPSLMKGKESLYKEFTWFEYKNSTYGSRLADNRLGHYERIAAS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01881 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 323 - -
Car01g01881 327 Pfam 2OG-Fe(II) oxygenase superfamily 173 274 IPR044861 -
Car01g01881 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 171 276 IPR005123 -
Car01g01881 327 SUPERFAMILY Clavaminate synthase-like 13 315 - -
Car01g01881 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 27 114 IPR026992 -
Car01g01881 327 PRINTS Isopenicillin N synthase signature 41 58 - -
Car01g01881 327 PRINTS Isopenicillin N synthase signature 200 221 - -
Car01g01881 327 PRINTS Isopenicillin N synthase signature 236 262 - -
Car01g01881 327 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 7 323 - -
Car01g01881 327 Gene3D - 3 313 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01881 Car-Chr1 43108316 43110542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01881 30 273 Glycosyltransferase AT5G59530 27.451 3.03e-22 94.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01881 01 43108316 43110542 Car01g01881 01 43108316 43110542 ECH