Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01863 ATGAATGATGATGAGGTTATTCTACTAGACTTTTGGCCAAGTCCTTTTGGAATGAGGGTGAGGATAGCCCTTGCTGAAAAGGGTATCAACTATGAATACAAAGAGGAACCCTTGTCGTCGTTGAGCAAGAGCACTTTCTTGCTACAAATCAACCCGGTTCAAAAGAAAATACCGGTTCTCATTCACAATGGAAAATCCATTTGTGAATCTCTGATTGCTGTTCAGTATATTGATGAAGTTTGGAATCATAAATCTCCTTTGTTGCCTTCTGATCCTTATTTAAGATCACAAGCTAGATTTTGGGCTGATTATGTTGACAAGCTATATCCAATTGGAAGAGACATTTATAGCAAAAAAGGAGAAGAACAAGAAGTTGCAAAGAAAGAATTCATAAATACTCTCAAATTATTGGAGCAACAACTTGGAGAAAAATCTTACTTTGGAGGAGACAAAATTGGTTTAGTGGATATATCACTCATCCCATTCTACAGTCGGTTTAAAGCCTATGAGACATTTGGCAACTTCAATACAGAGAATGAGTGTCCTAAGTTCATTGCTTGGGCCAAAAGATGCATGAAAATTGAGAGTGTTTCCAAATCTCTTCCAGACCAAGATAAGATCTATGACTTCATTGTGGACTACAGAAAGATTTATGGCATTGAGTAG 666 0.3709 MNDDEVILLDFWPSPFGMRVRIALAEKGINYEYKEEPLSSLSKSTFLLQINPVQKKIPVLIHNGKSICESLIAVQYIDEVWNHKSPLLPSDPYLRSQARFWADYVDKLYPIGRDIYSKKGEEQEVAKKEFINTLKLLEQQLGEKSYFGGDKIGLVDISLIPFYSRFKAYETFGNFNTENECPKFIAWAKRCMKIESVSKSLPDQDKIYDFIVDYRKIYGIE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01863 221 Pfam Glutathione S-transferase, N-terminal domain 6 79 IPR004045 -
Car01g01863 221 Gene3D - 91 221 - -
Car01g01863 221 CDD GST_C_Tau 92 214 IPR045074 GO:0004364|GO:0006749
Car01g01863 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 210 IPR010987 -
Car01g01863 221 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Car01g01863 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 214 - -
Car01g01863 221 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Car01g01863 221 SFLD Main (cytGST) 2 218 - -
Car01g01863 221 Gene3D Glutaredoxin 2 90 - -
Car01g01863 221 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Car01g01863 221 Pfam Glutathione S-transferase, C-terminal domain 126 190 - -
Car01g01863 221 CDD GST_N_Tau 6 81 - -
Car01g01863 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Car01g01863 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01863 Car-Chr1 42779272 42783087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01863 4 218 Glutathione S-transferase Gene Family AT1G78380 62.500 5.91e-98 282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01863 01 42779272 42783087 Car01g01863 01 42779272 42783087 ECH