Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01862 ATGGCTGATCAAGTTATTCTTCTAGATTTCTGGCCAAGTCCATTTGGAATGAGACTCAGAATAGCCCTTGCTGAAAAGGGTATCGAATTTGAGTACAGAGAAGAGGATTTAAGGAACAAGAGTCCTTTGTTGTTACAAATGAACCCTATTCATAAGAAAATTCCAGTTCTTGTTCATAATGGTAAACCAATTTGTGAATCACTGATTGCTGTTCAGTATATTGATGAGGTTTGGAATCATAAATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTGATTATGTTGATAAGAAGATATATGATGCTGGAAGGAACATTTGGACCAAAAAAGGAGAAGAGCAAGAAGCTGCCAAGAAGGAATTCATAGATGCACTTAAATTGTTGGAACAAGAGCTAGGAGACAAGACTTATTTTGGTGGAGACAAGCTTGGTTTTGTGGATGTAGCACTCATTCCATTCTACACTTGGTTTAAAGGCTATGAAACTTTTGGCAACTTTATTGTAGAGAAAGAGTGCCCAAAATTCATTGCTTGGGCTAAAAGATGTATGCAGATTGAGAGTGTTTCTAAGTCTCTTCCTGATCAGGAAAAGGTCTATGAGTTCATTGTGGATATCAGGAAGAAGATAGGCATTGAGTAG 660 0.3788 MADQVILLDFWPSPFGMRLRIALAEKGIEFEYREEDLRNKSPLLLQMNPIHKKIPVLVHNGKPICESLIAVQYIDEVWNHKSPLLPSDPYQRSQARFWADYVDKKIYDAGRNIWTKKGEEQEAAKKEFIDALKLLEQELGDKTYFGGDKLGFVDVALIPFYTWFKGYETFGNFIVEKECPKFIAWAKRCMQIESVSKSLPDQEKVYEFIVDIRKKIGIE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01862 219 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Car01g01862 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Car01g01862 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Car01g01862 219 SFLD Main (cytGST) 2 217 - -
Car01g01862 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Car01g01862 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
Car01g01862 219 Coils Coil 118 138 - -
Car01g01862 219 Gene3D - 88 219 - -
Car01g01862 219 CDD GST_N_Tau 5 78 - -
Car01g01862 219 Gene3D Glutaredoxin 1 87 - -
Car01g01862 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Car01g01862 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Car01g01862 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Car01g01862 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Car01g01862 219 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01862 Car-Chr1 42763187 42765115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01862 1 215 Glutathione S-transferase Gene Family AT1G78380 73.488 2.01e-121 342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01862 01 42763187 42765115 Car01g01862 01 42763187 42765115 ECH