Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01861 ATGGCAGATGAGGTGATCCTATTGAATTTTTGGCCAAGTCCTTATGGCATGAGGGTCCTAGTTGCATTAGAGGAAAAGGGCATCAAGTATGAGAACAGAGAAGAGGATTTCAGCAACAAGAGCCTTTTACTTCTACAAATGAACCCAATTCACAAGAAAATACCAGTTTTAATCCACAATGGCAAATCCATTTGTGAGTCACTAAATATTGTTGAATATATTGATGAGGTTTGGAATGATCATTCTCCATTGTTTCCTTCTGATCCTTACCAAAGATCCCAGGCTAAATTTTGGGCTAACTACATTGACACTAAGATATATGAGATTGGTATGAGGTATGCAAAATCTAAAGGAGAAGAAAAAGAAGCTGCAAAGAAAGAATTGCTTGAGGGTCTTCAAGTGTTGGAAGAACAACTAGGAAACAAACCTTATTTTGGTGGAGACAACTTTGGCTTTGTCGATGTGGCACTTGTTCCATTGCTTAACATGTTATATACCTTCACTTTTGCTGGCAAATTCATCCATGATGAAAAGTATCCCAATATCACTTCTTGGGCTAAAAGGTGTGCTCAAAAAGAGAGTGTATCCAAGTCTATTCCTCAAGAGGATAAGGTGAAACGTTTTGTAGATGAGAAAAGACTTGTACTTAACAAGGATTAG 660 0.3758 MADEVILLNFWPSPYGMRVLVALEEKGIKYENREEDFSNKSLLLLQMNPIHKKIPVLIHNGKSICESLNIVEYIDEVWNDHSPLFPSDPYQRSQAKFWANYIDTKIYEIGMRYAKSKGEEKEAAKKELLEGLQVLEEQLGNKPYFGGDNFGFVDVALVPLLNMLYTFTFAGKFIHDEKYPNITSWAKRCAQKESVSKSIPQEDKVKRFVDEKRLVLNKD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01861 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 211 - -
Car01g01861 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Car01g01861 219 Coils Coil 118 138 - -
Car01g01861 219 CDD GST_N_Tau 5 78 - -
Car01g01861 219 Pfam Glutathione S-transferase, C-terminal domain 111 192 IPR004046 -
Car01g01861 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 -
Car01g01861 219 SUPERFAMILY GST C-terminal domain-like 76 209 IPR036282 -
Car01g01861 219 Gene3D - 88 217 - -
Car01g01861 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Car01g01861 219 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Car01g01861 219 Gene3D Glutaredoxin 1 87 - -
Car01g01861 219 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Car01g01861 219 CDD GST_C_Tau 89 205 IPR045074 GO:0004364|GO:0006749
Car01g01861 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Car01g01861 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01861 Car-Chr1 42761094 42762503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01861 1 213 Glutathione S-transferase Gene Family AT1G78370 53.991 5.52e-88 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01861 01 42761094 42762503 Car01g01861 01 42761094 42762503 ECH