Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01857 ATGGATGAACCCACATTACTCTTCCCACCCGACACAGACCTCGACCTCAGTTTTACCAGCACCACCACCGACCGCACCTTCACCTCCTCCAGTGCTCGCACCAGTTTAGCCCGAACAAGCAGCCTTGCTCTCAGTTTCAACGATCGTCTCTCAACCGCCTCCGCTGCTGTCGATATTGTCTCCTCCACCGTCATCCGTCGTCCACACCGTAGCTCCGATCCAAACTGGACAGCTATCAAGGCCGCCACCAATCTCTCCTCCGACGGCAGACTTCACCTCCGTCATTTAAAACTCCTCCGCCACTTAGGCTCCGGTGACCTCGGCCGTGTCTTCCTCTGCCGCTTACGCGATTACGACGGCGCAAATTTCGCACTTAAAGTTGTTGACAAAGACCTTCTTAACCCTAAGAAACTCTCTCACGCGGAAACAGAAGCAGAGATTCTCCATACGCTGGATCACCCTTTTCTCCCCACGCTCTACGCGCGTATCGACGTGTCACACTACACGTGTCTCCTTATCGACTACTGCCCCGGCGGTGACCTCCACTCTCTCCTCCGTAAACAGCCTGGTAACCGTCTCACGCTCTCAGCAGCGCGCTTCTTCGCCGCGGAGATCCTCGTCGCGCTCGAGTATCTCCACGCGCTTGGAGTCGTATACCGCGACCTGAAACCCGAGAACGTGCTTCTACGCGAAGACGGACACGTCATGCTTTCAGATTTTGACCTTTGCTTCAAAGCTGACGTGGCACCCACGTTCGAACCCTGCACCGTTCACAAACCCAAAGTAGGCTCCACTTGCGGTTGTTTCAGTTATAACGGATCGAGATCACGCGATTCTCGCGAGCGTGTCGTTGCTGAGTTTGTTGCGGAACCTATAACGGCGTTTTCACGGTCGTGTGTTGGGACCCACGAGTATTTAGCACCGGAGCTTGTTTCGGGTAACGGTCACGGCAACGGCGTGGATTGGTGGGCTTTTGGTGTTTTCATTTACGAGTTGTTATACGGAACGACGCCGTTTAAGGGGTGTAGCAAAGAAAACACACTACGCAATATAGCATCTCCTAATAACGTGAGGTTCCACGTGGCGGAGAATGAGGAGGTAGGAATGGTAGAAGCGAGGGATTTGATAGAGAAGTTGTTAGTTAAAGATCCACGGAGGAGGCTAGGGTGCGCCAGGGGTGCTACGGATGTTAAACGACACCCTTTTTTTGATGGGATTAAATGGCCTTTGATTAGAAACTATAGGGCACCTGAAGTAAAGGGTTTAGTATTGAGGAGGAAAAAATCAGATTCACATCTCAGTCACGTGAATAGTAAAAGGAGGAGGTGGTGGAAGAGACTTGGTTGTGCATTGAGAAACAAAGGAACTCGATTTGATTTACTTTCAAACTTTAGTAATAATAATTATTATTGTTACGTTAATGATAGTAATGTTAGGACAGGTAAATTCAATTGA 1455 0.5031 MDEPTLLFPPDTDLDLSFTSTTTDRTFTSSSARTSLARTSSLALSFNDRLSTASAAVDIVSSTVIRRPHRSSDPNWTAIKAATNLSSDGRLHLRHLKLLRHLGSGDLGRVFLCRLRDYDGANFALKVVDKDLLNPKKLSHAETEAEILHTLDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHSLLRKQPGNRLTLSAARFFAAEILVALEYLHALGVVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPTFEPCTVHKPKVGSTCGCFSYNGSRSRDSRERVVAEFVAEPITAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGCSKENTLRNIASPNNVRFHVAENEEVGMVEARDLIEKLLVKDPRRRLGCARGATDVKRHPFFDGIKWPLIRNYRAPEVKGLVLRRKKSDSHLSHVNSKRRRWWKRLGCALRNKGTRFDLLSNFSNNNYYCYVNDSNVRTGKFN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01857 484 ProSiteProfiles Protein kinase domain profile. 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01857 484 PANTHER FLIPPASE KINASE 1-RELATED 7 438 - -
Car01g01857 484 Gene3D Transferase(Phosphotransferase) domain 1 297 417 - -
Car01g01857 484 Gene3D Phosphorylase Kinase; domain 1 95 179 - -
Car01g01857 484 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG2 7 438 - -
Car01g01857 484 CDD STKc_phototropin_like 103 419 - -
Car01g01857 484 Pfam Protein kinase domain 98 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01857 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Car01g01857 484 SMART serkin_6 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01857 484 Gene3D Transferase(Phosphotransferase) domain 1 180 248 - -
Car01g01857 484 SUPERFAMILY Protein kinase-like (PK-like) 74 419 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01857 Car-Chr1 42697764 42699443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01857 1 476 AGC Kinase Gene Family AT3G14370 65.849 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car01g01857 Pkinase 2.5e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01857 01 42697764 42699443 Car01g01857 01 42697764 42699443 ECH