Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01856 ATGGAAGACAATGAATGGAATTTCTTTGATCATGACCCTCTTCTTCTCACTGATGTTTCTTTTcaacaacaacaaaaacaacaaACCTCTTCCAATTGCGTTTTGCAAACACCACTTAGCTCTCTGAATTCAGCTATGGCGGAAGATCCTCAATCTTGTGGTGGAAACCCTAATTATGATTTGTCTCCGGAAAATGAAAGCTTTGAAAGGAATAGTGTGCAATTTGATGACCCAATTGCGAAAAATTTGGTTGATGGACGATCAATGTTGGGGTATTCTTTGACTTCACCAGATTTGGTGATCTGTTCTGGCTCACCAGATATTGCTGGAATCAGTTATTGTGATTCTCCTGAGATGTTGAAGAACAAAAATTGCTACAATTTGGACTCATCTATGGAGCTTTCTCTTGAGAATGGAATCAATGGATCTGAAGTTGAAGTTTACAATGGTCATAAGACTCCAACTGTTAAATTTTCCAATTTGTGTGAAACTATTGAACAAGAGGAAGAGTTGCTATCACCTGAAGCCTCATTTGAGCTTCATCCGCCACCAATAACCACGGACGAGTCGCCTCAAGACTACACTCATAGAGATAATGAAATGCTTGAAGATGCTAGAGTGTCTCAGGAGGCAGAGTTGGAATGCTCAGAAGACGTTGAGGATATTGGGGTAGAAGAGAAGTTTCAGAAGCTGAAAATAGATTTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACAAGAAGAATGTTGGGGGAGCTCAAGAGGGAGAATCAAGAGAAAAGTAGTGAATGTAAAGAAGCTTGGAACTCCTTAAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTAGCATTTGCTATTGAAGGGCAAGTGAAAGAGAAAAGCAAGTGGTTTACATCATTGAGAGACTTGATGAGGAAATTGAAGATTATGAAAATGGAACACATGAAGCTATTAGAGGAAGCGGAGGCATACAAGAAATATGAATTAGATATAAGTCAATTGGGGCTCATCATCAAGTCTAAAATGAATGAACAACTTGAGTTACATGAAGATCTCAAGTCCAAATACATTGAAGGGGCTAAGGTTCAAAAAGAGCTTTACAATAAGGTATTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTTAATGGTGAAGAGATAAAAGGAGGAGCCACAATGGCCTTAGATTTTGATTCTGCTAAAGATGGTGAGCTTACTGTGTTGTCAAATGGAGCTCCAAGAAAGACTTTTAAGTTTGATGCTGTCTTTGGCCCTCAAGCTGAACAAGCTGATATATTTGAGGATACTGTACCATTTGCAACCtcggttttagatggttacaatgtatgcatttttgcatatggacagaccggtacaggaaaaaccttcacaatggAGGGCACAGAAGAGGCTCGTggagttaatttcaggactcttgagaaaatgtttgatataatcaaggaaagacagactctctattgttatgatgtctctgtaagtgtcttagaagtgtacaatgagcaaataagagatttgttGGTTCCAGGAAATAATCCAGGAATGTCTGCAAGAAGACTTGAGATAAGACAAGCTGGTGAAGGAATGCATATTCCAGGGTTGGTTGAGGCACATGTAGACAACATGAATGAAGTGTGGGAAGTTCTACAAACCGGTAGCAATGCAAGGGCTGTTAGCGCAACCAATGCGAATGAGCACAGTAGCCGATCTCACTGCATTCACTGTGTCATGGTTAAGGGAGAAAATTTGTTGAATGGAGAACACACTAGAAGCAAGTTATGGcttgtggacttagcaggaagtgaaagagttgcaaagacagaagtgcaaggtgatagattgaaggagacacaaaatattaataggtctctttctgcacttggtgatgtcatatcagctcttgcaaccaaaagttcacacatcccttTCAGGAACTCTAAGCTTACACACTTGCTTGCAGACTCATTAGgaggagattcaaaggcactcatgtttgtacagatcagtcctaatgaaagtgatttgggcgagacgatttgctctttgaactttgctagtagagtAAGGGGTATAGAATTGGGCCCTCCAAAAAAGCAGTGGGACACTATTGAACTTCTGAAACACAAACAAATGGCTGAGAAAACTAAACAAGAGCTAAAGCTGAAGGATTTTCAAATCAAGAAGATGGAGGAAACAATCCATGGATTTGAGTCCAAAATGAAGGAAAGGGATCATAAAAACAAAAGTCTTCAAGACAAGGTCAAGGAACTTGAATCACAACTTATGATTGAGAGAAAGCTAGCGCGTCAACACGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAAACATCAAGAAGAGCAAATCAATGCAGTTTTGAGACCAACAACAACGCCTGCAAATCGACCATTAGCAACTCTCAAGAATTTCAATGATCCAACTAGACCCTCAATGGAGAACAACATCTTTAAACCTCACAACATACCCTTTTCTACAATAGAAAGCTCCATCAAATACATTGATCACAACGAAAAAGAAAACAATCCCGACATGGCTGATAATAATAGTTCACTACTTCCAAAAAGGGCTGCAAGAGCTTCTATATGCACAATGACACCGCGCGCTCCTTCGGCAACTGTTTCAAGGAGAAACTCTTTGATTCCACTCCCAAGCTTAGCACAATTTCAATCACCATTCATACCGAAGTTATTATCAAACCAAGAAGTGAATGAGGAACCAGAAACAGCACAAGCTCATTGTGAGAGTCCTAAAGAAGTAAAAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCATACATAAGAAAGGACAAGTGAAGTCTCCATTACAACAACATATGAGAAAGGTTGGTGGTGTAAATGTGGGAATGGAGAAAGTGAGAGTTTCTATTGGAAGTAGAGGGAAATTAGCACTAAGGGGGGTGCAAGTTGGAAGTGTTAGAAGAGGTGGTGCTAAAGAGATTCAACAGAAGAAGGAAAGGGGATGGATATAA 3063 0.3441 MEDNEWNFFDHDPLLLTDVSFQQQQKQQTSSNCVLQTPLSSLNSAMAEDPQSCGGNPNYDLSPENESFERNSVQFDDPIAKNLVDGRSMLGYSLTSPDLVICSGSPDIAGISYCDSPEMLKNKNCYNLDSSMELSLENGINGSEVEVYNGHKTPTVKFSNLCETIEQEEELLSPEASFELHPPPITTDESPQDYTHRDNEMLEDARVSQEAELECSEDVEDIGVEEKFQKLKIDFECQRKELAETRRMLGELKRENQEKSSECKEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFTSLRDLMRKLKIMKMEHMKLLEEAEAYKKYELDISQLGLIIKSKMNEQLELHEDLKSKYIEGAKVQKELYNKVLELRGNIRVFCRCRPLNGEEIKGGATMALDFDSAKDGELTVLSNGAPRKTFKFDAVFGPQAEQADIFEDTVPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQTLYCYDVSVSVLEVYNEQIRDLLVPGNNPGMSARRLEIRQAGEGMHIPGLVEAHVDNMNEVWEVLQTGSNARAVSATNANEHSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLADSLGGDSKALMFVQISPNESDLGETICSLNFASRVRGIELGPPKKQWDTIELLKHKQMAEKTKQELKLKDFQIKKMEETIHGFESKMKERDHKNKSLQDKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQINAVLRPTTTPANRPLATLKNFNDPTRPSMENNIFKPHNIPFSTIESSIKYIDHNEKENNPDMADNNSSLLPKRAARASICTMTPRAPSATVSRRNSLIPLPSLAQFQSPFIPKLLSNQEVNEEPETAQAHCESPKEVKSGVKKIGSILRRSIHKKGQVKSPLQQHMRKVGGVNVGMEKVRVSIGSRGKLALRGVQVGSVRRGGAKEIQQKKERGWI 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01856 1020 MobiDBLite consensus disorder prediction 44 65 - -
Car01g01856 1020 Pfam Kinesin motor domain 387 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 CDD KISc_C_terminal 379 708 - -
Car01g01856 1020 ProSitePatterns Kinesin motor domain signature. 606 617 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car01g01856 1020 ProSiteProfiles Kinesin motor domain profile. 381 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 PANTHER KINESIN-LIKE PROTEIN KLP-3 215 1007 - -
Car01g01856 1020 Coils Coil 755 782 - -
Car01g01856 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 744 IPR027417 -
Car01g01856 1020 SMART kinesin_4 379 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 Coils Coil 727 747 - -
Car01g01856 1020 Coils Coil 235 262 - -
Car01g01856 1020 PRINTS Kinesin heavy chain signature 455 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 PRINTS Kinesin heavy chain signature 576 593 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 PRINTS Kinesin heavy chain signature 607 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 PRINTS Kinesin heavy chain signature 656 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g01856 1020 Gene3D Kinesin motor domain 376 749 IPR036961 -
Car01g01856 1020 Coils Coil 305 325 - -
Car01g01856 1020 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 215 1007 - -
Car01g01856 1020 MobiDBLite consensus disorder prediction 813 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01856 Car-Chr1 42680922 42686777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01856 356 733 Calmodulin-binding Proteins AT5G65930 43.081 1.02e-80 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01856 01 42680922 42686777 Car01g01856 01 42680922 42686777 ECH