Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01636 ATGCAAGAAATTCATTCCATCGGTGGTAGAAATCTTTTCGGCGATGACAGAGATAGAAGAATGAGAACTAACTACCACCACCAAAATCATCATGCTTTGAAGTGTCCTCGTTGTGACTCCTTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAACCTCGTTACTTCTGCAAGAACTGCCGTCGATACTGGACTAAAGGCGGCGTCCTTCGTAATGTCCCCATCGGCGGTGGTTCTCGCAAATCAAAGCCCTCAAACAGCAATAACTCATCTTCCTCCACAACTCCACCAGCAACCACACGAAAATCACCACCACCGGAAGACAACTCCAATTCTCACTCCAGCAGTGAAAGCTCCACCTTCACCACCCCCACTGCCACCGCGGAGGCGAAGACTCCGATATCGAACGCTACATCGAAGGTGTTTTCCGTTAACTCTGCTTCGAAGCCGGAACAAGTTGGTAGCTTCACCAGCCTTGTCCCTTCAACTTTAACAAACGACGCGTTTTCGTTTGGGTTTGGAAATAATGTTCTCGATGCGTCGTCGTTTCGGTTCGGCGATAGTCATCAACGAGGGGATGATCAAGTACATGTGGCACAGGGTGGAGACTCGTTGGGTATATGTCAGTGGCAGCAACAGAGCAGTTATCAACGGACGTCGTTGCTGGATCATCAGCAGTTAGCAAATGGATTTGGACCGTTAGATTGGCAAGGTGGTGCGGGTAATTGTTTGTTTGATGTTCGTGATGTCGTTGATCAGTCTTACTGGACACACCCTCACTGGTCTCATCATGTTAATCCGTCTTCTCTCTTTCATCTTCCCTGA 834 0.4808 MQEIHSIGGRNLFGDDRDRRMRTNYHHQNHHALKCPRCDSFNTKFCYYNNYNLSQPRYFCKNCRRYWTKGGVLRNVPIGGGSRKSKPSNSNNSSSSTTPPATTRKSPPPEDNSNSHSSSESSTFTTPTATAEAKTPISNATSKVFSVNSASKPEQVGSFTSLVPSTLTNDAFSFGFGNNVLDASSFRFGDSHQRGDDQVHVAQGGDSLGICQWQQQSSYQRTSLLDHQQLANGFGPLDWQGGAGNCLFDVRDVVDQSYWTHPHWSHHVNPSSLFHLP 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01636 277 MobiDBLite consensus disorder prediction 82 135 - -
Car01g01636 277 Pfam Dof domain, zinc finger 32 86 IPR003851 GO:0003677|GO:0006355
Car01g01636 277 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Car01g01636 277 MobiDBLite consensus disorder prediction 74 135 - -
Car01g01636 277 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Car01g01636 277 PANTHER DOF ZINC FINGER PROTEIN 4 18 261 - -
Car01g01636 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 261 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01636 Car-Chr1 35340473 35341721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01636 18 277 C2C2-Dof Transcription Factor Family AT5G60850 38.732 3.59e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car01g01636 zf-Dof 4.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01636 - - cam:101508706 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00867 07 7710720 7712767 Car01g01636 01 35340473 35341721 PCT