Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00332 ATGGAGCAAGAAGGTGTTGATGGAAGAAGAGGTGAAATGAATAAACAAGTTCAGATTCATCCACCACAACCACCTCAAAAATGTCCTCGCTGTGATTCTTTCAACACCAAGTTCTGTTACTACAATAACTATAGCCTTTCGCAGCCTCGATACTTTTGCAAATCATGCAGAAGGTATTGGACTCAAGGTGGAACTTTGAGAAATGTTCCCGTTGGTGGTGGTTGTCGTAAGGGAAAAAGAGCCAAAAACTCGTCTTCTACTTCCTCTGGGAATTCTTCTTTGTCTCAGACACCAGTGTTATCGTCTGCACAACAGCAGACGATGGCTCTGGCTCTGATGACTAAAGATGCTTCCTTTTCATCTGCTCTTCCTTTTTATCAAGGTGGCGGCGGTGTTGGTGGTGTTGGTTATATGTCTTCATTTGCAGGTTTTAATAACAATAATCAAATGAATCTACCATCATCAACACACTCAAACCCTTTTGAGAATGTTGGTGGTCATTCAAATTTGGGTCTTTTACAAGGTTTTAATGTTGCTGCTGCTGCTCTTGGCAATTCAACACAAGGACAAAATCGTCCATCTCAATTCTTTCCAATGGGTATGTTCACTTCTGAACAACAACAAGGTTTGAATTTGATTCCACcttgttctggttctggctctggtgttggtgttggtgctCTTACTCATCATGAAAATTGGACTCAAAGTTTCATGaataataatagtggtaataataataGGGTCAATGATCCTTCTCTTTGGAGTACTATTAGCACCACCACTTCAATTGGTGGTGCAAATAACTCTGATAGGAACCTAggtggtggtagcggtggtggtgctagtgtcggtggtTCTTCTTCTTTGGCACCAAATCAATGGCCTGATTTGTCAGGATTCAACCCTTCTCAGTGA 918 0.366 MEQEGVDGRRGEMNKQVQIHPPQPPQKCPRCDSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKGKRAKNSSSTSSGNSSLSQTPVLSSAQQQTMALALMTKDASFSSALPFYQGGGGVGGVGYMSSFAGFNNNNQMNLPSSTHSNPFENVGGHSNLGLLQGFNVAAAALGNSTQGQNRPSQFFPMGMFTSEQQQGLNLIPPCSGSGSGVGVGALTHHENWTQSFMNNNSGNNNRVNDPSLWSTISTTTSIGGANNSDRNLGGGSGGGASVGGSSSLAPNQWPDLSGFNPSQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00332 305 MobiDBLite consensus disorder prediction 71 100 - -
Car01g00332 305 MobiDBLite consensus disorder prediction 260 305 - -
Car01g00332 305 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 304 IPR045174 GO:0003700|GO:0006355
Car01g00332 305 Pfam Dof domain, zinc finger 25 80 IPR003851 GO:0003677|GO:0006355
Car01g00332 305 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 15 304 - -
Car01g00332 305 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Car01g00332 305 MobiDBLite consensus disorder prediction 1 26 - -
Car01g00332 305 MobiDBLite consensus disorder prediction 80 100 - -
Car01g00332 305 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00332 Car-Chr1 2556323 2557609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00332 6 201 C2C2-Dof Transcription Factor Family AT5G60200 41.627 3.17e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car01g00332 zf-Dof 1.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00332 - - mtr:MTR_2g014060 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00332 01 2556323 2557609 Car01g00332 01 2556323 2557609 ECH
Car06g01597 06 15750985 15753247 Car01g00332 01 2556323 2557609 PCT