Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02417 ATGGCTAAGAAAGGTGTTGTTGTTCAAGTATTGTTGGTGGTAGCAATTACAGTCTGCTGTCTCGGGGCGACTGAAGCTCAATCCCAGTCTCTTGGGTTCGAATGCAGGTCAGACTCAGTCCAATGCCGTGCCCTCATCGATTACACTGCACCAAATAACACCAATTACAGAGCAATCCAGAAACTGTTCAACGTCAAACACCTCATCGACATTGTGGGTGCCAACAGCCTTCCGGCCAACACCAACGGTACCGATCCCGTCAACAAAGGCCGGACTATCCGAATCCCTTTCGGCTGCAAATGTCGGAACTCCACCGGATTGTCATCGAACCGCCGTCCCGTTTACACCGTGCAGAGCGGCGACACTCTCTCCCACATAGCCGAGGAAGTGTTCTCGCGACTGGTGACGTGGCAACAAATCCAAGCAGCCAATAATTTAACGGACCCAAACAAGATAGATGTGGGGCAGGAGTTCTGGATCCCATTGCCGTGTAGCTGCGATCAGGTGAACGACACGACGGTGGTACACTATGGACACGTGGTTGCTTCTGGCAGCACTGTCCAACAGATAGCTCAGCAGTACGGCACCACACAGGACACTCTCCTCAATCTCAATAATATGACTGATCCGAACAAACTTCAAGCCGGTCAAATTTTGGATGTTCCTCTCAaagCTTGTGGGTTGAATGTGAAAAATGAGTCATTGGATTTCCATTTGCTTGTTGCCGATACTACTGAGCTCTACACAGCAAATGGCTGCGTCAAGTGCAGATGTGACACTGCCAACAACTTAACAGTGCAATGCGAGCCATCGCAGGCTAAGCCGGCCAACTGGTCTACTTGCCCAACAATGCAATGTCAAACTTCTGATTCTGTCCAACTCTTCATCGGCAACGCCACAGATTCTTGTCCCCGAACAACGTGTGCCTATGCTGGTTATGCCGCCAACCAAACTATCTTCACTACTCTTGTCACTGATTCCACTTGTCCTGCATCGGGAGCATCCAGGATCACTTTGCCATCCTCCTTTCTCTCTATCTTCTTCGCCAGTATTGCCGTGTATCagtatttttcttgtcttttcgATTA 1088 0.4881 MAKKGVVVQVLLVVAITVCCLGATEAQSQSLGFECRSDSVQCRALIDYTAPNNTNYRAIQKLFNVKHLIDIVGANSLPANTNGTDPVNKGRTIRIPFGCKCRNSTGLSSNRRPVYTVQSGDTLSHIAEEVFSRLVTWQQIQAANNLTDPNKIDVGQEFWIPLPCSCDQVNDTTVVHYGHVVASGSTVQQIAQQYGTTQDTLLNLNNMTDPNKLQAGQILDVPLKACGLNVKNESLDFHLLVADTTELYTANGCVKCRCDTANNLTVQCEPSQAKPANWSTCPTMQCQTSDSVQLFIGNATDSCPRTTCAYAGYAANQTIFTTLVTDSTCPASGASRITLPSSFLSIFFASIAVYQYFSCLFD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02417 362 SUPERFAMILY LysM domain 114 162 IPR036779 -
Bva14g02417 362 CDD LysM 114 160 IPR018392 -
Bva14g02417 362 Gene3D LysM domain 109 168 IPR036779 -
Bva14g02417 362 SUPERFAMILY LysM domain 178 222 IPR036779 -
Bva14g02417 362 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 24 330 - -
Bva14g02417 362 SMART LysM_2 114 161 IPR018392 -
Bva14g02417 362 SMART LysM_2 178 222 IPR018392 -
Bva14g02417 362 CDD LysM 179 221 IPR018392 -
Bva14g02417 362 ProSiteProfiles LysM domain profile. 113 160 IPR018392 -
Bva14g02417 362 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 24 330 - -
Bva14g02417 362 Gene3D LysM domain 169 227 IPR036779 -
Bva14g02417 362 ProSiteProfiles LysM domain profile. 177 221 IPR018392 -
Bva14g02417 362 Pfam LysM domain 179 222 IPR018392 -
Bva14g02417 362 Pfam LysM domain 115 161 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02417 Bva-Chr14 20679761 20682705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02417 33 343 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 46.835 8.59e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02417 - - twl:120001966 367.851