Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01398 ATGCAGCAAGGAGATGATGGCAGAGGAGGTGGTGGCGGTGGCGGGGCAGGTCGTCAAGATCGGAGATTGAAGGCCGTGCACGGCGGAGACGGGCAGTGTCTGCAACAACAGCATCCTCAGGCTCAGAAATGTCCTCGCTGCGAATCTCCCAACACAAAGTTCTGTTACTACAACAACTACAGCTTGTCACAGCCAAGGTACTTCTGTAAAGCGTGCAGAAGGTACTGGACCCAAGGCGGCACCTTGAGGAATGTACCCGTTGGCGGCGGTTGCCGTAAAGGGAAGCGCGCCAAAACCACTGCTTCCTCTTCTACTAGCTCTGACACTTCCTACCGGTCTCTGTCGACGCCACCGCAGGAAGTGGTGGTTCAATCGCAGCCAGGGAGACCCACCATCTTATCCTCTGACCACCCTGTTATAAGGGCTACAAAAGACCTCTCTGCCGCCTTGGCTTCTCCTCCTCCGGCGGCGGCTCCCGGAATCAGCCCCTATTATCAGGGTTTACCTTCTCTGGCTGCCATTCAGATGAACCCATCACAGCCGATTTTCAAGCAGGGTCTGAATGCCGGAACCGATGCTGTGGGTTCTTCCAATTTGGATATTTTATCTGGTTTCAATGTTGTTTCTCTTGGCTCACAACGCCAGATTCGTCCACCATCGCAGTTTTTCCAAATGGGtagcagagaaagagaggtGGAAGCTCTGTTTCCAGCAGAACAAAGAGGTTTGGTTCAATCAACAATGGCTGATAACAGCACATGTGTTTCTCACCTTGATTGGCCTCGGAGCTTCATCAGCAATGCCACTAACCATAGAGCCCATGCCGATGCCTCTCTTTGGAGCACTATCAGCACAAGTTCCATTAGTGGCAATTCTGAAAGCAATGCAAATTCTGGGTCTTCTTCTCTGATCCCAAATCAGTGGCCTGATCTCCCAGGCTATGGTCCTCCACCATG 956 0.5146 MQQGDDGRGGGGGGGAGRQDRRLKAVHGGDGQCLQQQHPQAQKCPRCESPNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVPVGGGCRKGKRAKTTASSSTSSDTSYRSLSTPPQEVVVQSQPGRPTILSSDHPVIRATKDLSAALASPPPAAAPGISPYYQGLPSLAAIQMNPSQPIFKQGLNAGTDAVGSSNLDILSGFNVVSLGSQRQIRPPSQFFQMGSREREVEALFPAEQRGLVQSTMADNSTCVSHLDWPRSFISNATNHRAHADASLWSTISTSSISGNSESNANSGSSSLIPNQWPDLPGYGPPP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01398 318 MobiDBLite consensus disorder prediction 97 132 - -
Bva14g01398 318 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 317 IPR045174 GO:0003700|GO:0006355
Bva14g01398 318 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Bva14g01398 318 MobiDBLite consensus disorder prediction 87 135 - -
Bva14g01398 318 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Bva14g01398 318 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Bva14g01398 318 MobiDBLite consensus disorder prediction 286 307 - -
Bva14g01398 318 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 9 317 - -
Bva14g01398 318 MobiDBLite consensus disorder prediction 286 318 - -
Bva14g01398 318 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01398 Bva-Chr14 6957209 6959227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01398 40 152 C2C2-Dof Transcription Factor Family AT2G28510 56.637 1.89e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva14g01398 zf-Dof 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01398 - - qsu:112029439 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01398 14 6957209 6959227 Bva14g01398 14 6957209 6959227 ECH
Bva13g01150 13 5717431 5718426 Bva14g01398 14 6957209 6959227 PCT