Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01330 ATGGGTTTGAGTTCTAAGCAGGTATCAAGTAGTGGCCTTGATTGGAACCAGACGTTATTGCAAGCTCAAGACTTGGAACTGCCAAAGCCTACTCCTCCACTGATGAGgaagcaacaacaacaaaaccaGCAGCAATCAGAGGCTTTGAAGTGCCCAAGATGTGATTCTTCAAACACCAAGTTTTGCTATTACAACAACTACAACAAGTCACAGCCTCGCCATTTCTGCAGGACTTGCAAGAGGCACTGGACAAAGGGAGGAACTTTACGCAATGTTCCCGTTGGCGGTGGccggaaaaataaaagagtcaAGAAATCAACCAATGCAACCTCCTCTGCCACAACCAGCTCTAACAGTACAACCACCGTGGCCACCACCACTTCTATTGGCAATTTGGATGCAGGGTTGAACTTGAATACCCACATGGCAATTCATCCTCCTCAGCAAAGACACAGTCTTTCTCTTGCACTGGGTGGTCAGAAAAACTTGCCACCCTCCCTCTATCAAACTCTGATTCGTCCACCATCTCTGCTGCCACAGCATAATCATCTGATGAATACCAGAAACCTAGAAAGCAAAGACTTTGGCACTGCAAATAATGGTCTTTTTCTGGGTTCAACTACACTGCCTCTTGCGCAAAATCAAAACTTGCATTTTCCCTTCTCATCCTCAGCCTCTTTTGACACAAACCCATGTTCAGTTTCAACCTCTTTGAGATCCTCCAGTGTTTATAACTATGGAGAAGAGCTTAAAACAATGGAGGAGCCAACCATCAACAGCTTATTGACCTCCACAACAAGTGGCACTAACACACAGCCTTGGGAGATGCCAGCAACATGTGTTGGCATGGAAATGTCAAACTATTGGAGTTGGGAGGATTTGGATTCTTTGGTCTCAACTGATCTAAATGTTCCATGGGAGGATTCTGATTTAAAGccctg 941 0.4315 MGLSSKQVSSSGLDWNQTLLQAQDLELPKPTPPLMRKQQQQNQQQSEALKCPRCDSSNTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSTNATSSATTSSNSTTTVATTTSIGNLDAGLNLNTHMAIHPPQQRHSLSLALGGQKNLPPSLYQTLIRPPSLLPQHNHLMNTRNLESKDFGTANNGLFLGSTTLPLAQNQNLHFPFSSSASFDTNPCSVSTSLRSSSVYNYGEELKTMEEPTINSLLTSTTSGTNTQPWEMPATCVGMEMSNYWSWEDLDSLVSTDLNVPWEDSDLKP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01330 313 MobiDBLite consensus disorder prediction 27 50 - -
Bva14g01330 313 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Bva14g01330 313 MobiDBLite consensus disorder prediction 34 50 - -
Bva14g01330 313 MobiDBLite consensus disorder prediction 106 121 - -
Bva14g01330 313 MobiDBLite consensus disorder prediction 90 121 - -
Bva14g01330 313 PANTHER OS06G0284500 PROTEIN 38 246 - -
Bva14g01330 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 246 IPR045174 GO:0003700|GO:0006355
Bva14g01330 313 Pfam Dof domain, zinc finger 47 101 IPR003851 GO:0003677|GO:0006355
Bva14g01330 313 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01330 Bva-Chr14 6575722 6577337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01330 37 124 C2C2-Dof Transcription Factor Family AT1G51700 59.091 1.60e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva14g01330 zf-Dof 2.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01330 - - gmx:778119 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01101 13 5434500 5436178 Bva14g01330 14 6575722 6577337 PCT