Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00405 ATGGCAATCCACCATCACAATGAACCACTTCTAGACCACCATGAAAATGCATCATTTTTCCTGGATGTTCTCTACTGTGATGAGGAAAAATGGGATGAGGAAGAACACGCTGGAGAGTTAACAGAAGAAGAATCTAATGTGACTGACCATGAATCCCTTCTTCCTCTGCTCTTGTTGGAGCAAGATTTGTTCTGGGAAGATGAAGAGCTACACTCTCTCTTCTCCAAAGAACAGATACAACAAGAAAAAGCCCATTCAAATCTGGATAGTGTGGATTTCTTTGactcttctctctctgtgGCTCGTCGTGAGGCAGTGCTATGGATGCTTAAAGTCAATGCCCATTATGGGTTCACCACTCTCACTGCTACACTAGCCATAAATTATCTGGATAGATTCCTTTTGAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAGCTTGTGGCCGTTACTTGCCTTGCTCTTGCAGCAAAAGTTGAAGAGACTCAAGTGCCCCTTCTTTTAGACCTCCAAGTTGAGGATACGAAATACATGTTTGAAGCTAAAACTATTCAGAGAATGGAGCTGCTGGTACTTTCTGCACTTAAATGGAAGATGCACCCGGTGACCCCACTCTCATTTCTAGATCACATTATAAGGAGGCTTGGATTGAAAACCCATCTTCATTGGGAATTCCTCCGGCGCTGTGagcatcttcttctttctgtGCTTTCAGATTCAAGATTTGTTGCTTGTCTTCCATCTGTGTTGGCCGCTGCGACAATGCTGCACGTTATAGACCAGATTGAACAGAACGATGGGGCAGAATACAAAAAGCAGCTTCTTGATGTTCTTAAAATTAGCGAGGAGAAAGTAGACAAATGCTATAATCTTATCCTAGAGATCTCACTTGCTAATAATTATGGTCATAACAACGGTCGTAAGCGCAAGTATGACAAAATCCCAGACAGCCCAAGTGGCGTAATTGATGCTGATTTTAGCTCTGATGCTTCCAACGATTCGTGGGCAGTGGGGTCGTCTTTATATCCATCATCACCAGAGCCTGTGTTCAAGAAAAGCAGAGTCCAAGagcagcaacagcagcagcaacaattGAAACTGTCACCGCTCAACCGGGTCATTGTCGGAATCGTTGGCACTTCTCCTTA 1154 0.4151 MAIHHHNEPLLDHHENASFFLDVLYCDEEKWDEEEHAGELTEEESNVTDHESLLPLLLLEQDLFWEDEELHSLFSKEQIQQEKAHSNLDSVDFFDSSLSVARREAVLWMLKVNAHYGFTTLTATLAINYLDRFLLSFHFQREKPWMIQLVAVTCLALAAKVEETQVPLLLDLQVEDTKYMFEAKTIQRMELLVLSALKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLSDSRFVACLPSVLAAATMLHVIDQIEQNDGAEYKKQLLDVLKISEEKVDKCYNLILEISLANNYGHNNGRKRKYDKIPDSPSGVIDADFSSDASNDSWAVGSSLYPSSPEPVFKKSRVQEQQQQQQQLKLSPLNRVIVGIVGTSP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00405 384 SUPERFAMILY Cyclin-like 64 202 IPR036915 -
Bva14g00405 384 SMART cyclin_7 107 195 IPR013763 -
Bva14g00405 384 SMART cyclin_7 208 296 IPR013763 -
Bva14g00405 384 MobiDBLite consensus disorder prediction 339 366 - -
Bva14g00405 384 SUPERFAMILY Cyclin-like 205 314 IPR036915 -
Bva14g00405 384 Gene3D - 203 292 - -
Bva14g00405 384 CDD CYCLIN 102 194 IPR013763 -
Bva14g00405 384 Pfam Cyclin, C-terminal domain 204 314 IPR004367 -
Bva14g00405 384 PANTHER CYCLIN D3.1 PROTEIN 36 356 - -
Bva14g00405 384 PANTHER CYCLINS 36 356 IPR039361 -
Bva14g00405 384 Pfam Cyclin, N-terminal domain 86 201 IPR006671 -
Bva14g00405 384 SMART Cyclin_C_2 204 332 IPR004367 -
Bva14g00405 384 Gene3D - 99 202 - -
Bva14g00405 384 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00405 Bva-Chr14 1995264 1997340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00405 1 299 Core Cell Cycle Gene Families AT4G34160 59.197 8.32e-118 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00405 14 1995264 1997340 Bva14g00405 14 1995264 1997340 ECH
Bva13g00327 13 1534512 1536517 Bva14g00405 14 1995264 1997340 ECH
Bva06g02120 06 14019081 14021032 Bva14g00405 14 1995264 1997340 ECH
Bva10g00685 10 5752452 5754587 Bva14g00405 14 1995264 1997340 ECH