Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00401 ATGGGTCTCTTTCCCAGATCATCGTCCTTTGCTCTATTGCTGCTTTCCCTTTCATTGTTCGTTGTTGGGTTTGCTCAGGACATGTCCATCATTGACTACGATGCCAAGCATTTCCCTCACGGGAGAAGAAGGACCGAGGAGCAGATGAGGACCATTTACGAGGCGTGGATGCGCAAGCACGCCAAAGCCTATAATGCCTTGGGAGAGAAAGACTCcagatttgatatttttaaagacAATCTCAGATTCATTGACGAGCACAACAATGCAGAGGGCCGCACCTACAAGTTGGGGTTGACCCGCTTCGCTGATCTCACCAATGACGAATACCGGGCCATGTATTTGGGTGCCCGAATGAACCGATCCAATAGAATGCTTTCCGCCTCCAAGAAGAGTCATCGTTATGCTTTCCGTGCCGGCGAGGAACTGCCGGAGTCCATGAATTGGAAAGAGAAGGATGCGGTTGTTCCCGTTAAAGATCAAGGCCAATGTGGGAGTTGCTGGGCATTCTCGACTGTAGCTGCCGTGGAAGGGATCAATAAAATTGTGACTGGTGAATTGATATCCCTGTCAGAGCAAGAACTGGTGGACTGTGATAGAAGTTATAACATGGGGTGCAATGGAGGTCTCATGGACTATGCTTTCGATTTTATCATGAACAATGGAGGCATTGATACGGAAGAGGACTACCCCTACCATGCTCGCGATGGTTTTTGTGATCCCAATAGGAAAAATGCTAAAGTTGTCAGCATCGATGGGTATGAAGATGTTCCTGAAAATGATGAGAAATCCTTGCAGAAGGCAGTGGCAAACCAACCAGTTAGTGTTGCCATTGAAGCTGGTGGCAGGGCATTTCAACTTTATGAATCGGGCGTTTTCACTGGGCTGTGCGGAACGCAACTTGATCATGGCGTGGTGGCAGTTGGATATGGAACAGAAAATGGTAAAGATTACTGGTTGGTAAGGAACTCTTGGGGCCCCAGTTGGGGCGAGGATGGTTACATCAAGCTAGAGCGTAATGTGAATAGCACGGGCGGCAAGTGTGGGATAGCAATGGAGGCATCATACCCAGTGAAGAATGGTCAGAATCCCCCAAAGCCCGGTCCTTCCCCTCCATCTCCACCTCCACAAGCTTCAACAGTTTGTGATGATTACTACTCCTGCCCACCCGGAACCACTTGCTGCTGCCTTTATCAGTATCAAAGCTACTGCTTTGGATGGGGATGCTGCCCCCTCGAGTCTGCAACCTGCTGCGATGATTATGAGAGTTGCTGCCCTCGAGAATTTCCAGTCTGCGATACTCAAGCCGGAACCTGCCGAGTGAGCAAGGAGAGTCCCTTCGGAGTACAAGCATTGAAAAGAACTCCTGCCATTGTTACACGAGAGAGAGGTGACAGGAAAATTACGGTTACATG 1415 0.4869 MGLFPRSSSFALLLLSLSLFVVGFAQDMSIIDYDAKHFPHGRRRTEEQMRTIYEAWMRKHAKAYNALGEKDSRFDIFKDNLRFIDEHNNAEGRTYKLGLTRFADLTNDEYRAMYLGARMNRSNRMLSASKKSHRYAFRAGEELPESMNWKEKDAVVPVKDQGQCGSCWAFSTVAAVEGINKIVTGELISLSEQELVDCDRSYNMGCNGGLMDYAFDFIMNNGGIDTEEDYPYHARDGFCDPNRKNAKVVSIDGYEDVPENDEKSLQKAVANQPVSVAIEAGGRAFQLYESGVFTGLCGTQLDHGVVAVGYGTENGKDYWLVRNSWGPSWGEDGYIKLERNVNSTGGKCGIAMEASYPVKNGQNPPKPGPSPPSPPPQASTVCDDYYSCPPGTTCCCLYQYQSYCFGWGCCPLESATCCDDYESCCPREFPVCDTQAGTCRVSKESPFGVQALKRTPAIVTRERGDRKITVT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00401 471 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 35 387 - -
Bva14g00401 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 161 172 IPR000169 -
Bva14g00401 471 Gene3D Cysteine proteinases 30 360 - -
Bva14g00401 471 Gene3D Granulin 378 442 IPR037277 -
Bva14g00401 471 PRINTS Papain cysteine protease (C1) family signature 318 324 IPR000668 GO:0006508|GO:0008234
Bva14g00401 471 PRINTS Papain cysteine protease (C1) family signature 303 313 IPR000668 GO:0006508|GO:0008234
Bva14g00401 471 PRINTS Papain cysteine protease (C1) family signature 161 176 IPR000668 GO:0006508|GO:0008234
Bva14g00401 471 CDD Peptidase_C1A 144 357 IPR039417 -
Bva14g00401 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 318 337 IPR025661 -
Bva14g00401 471 PANTHER CYSTEINE PROTEASE 35 387 - -
Bva14g00401 471 Pfam Granulin 393 439 IPR000118 -
Bva14g00401 471 SMART Inhibitor_I29_2 53 110 IPR013201 -
Bva14g00401 471 Pfam Papain family cysteine protease 143 358 IPR000668 GO:0006508|GO:0008234
Bva14g00401 471 SUPERFAMILY Granulin repeat 380 413 - -
Bva14g00401 471 SMART GRAN_2 382 439 IPR000118 -
Bva14g00401 471 Pfam Cathepsin propeptide inhibitor domain (I29) 53 110 IPR013201 -
Bva14g00401 471 SMART pept_c1 143 358 IPR000668 GO:0006508|GO:0008234
Bva14g00401 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 301 311 IPR025660 -
Bva14g00401 471 SUPERFAMILY Cysteine proteinases 46 359 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00401 Bva-Chr14 1979898 1982291 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00401 14 1979898 1982291 Bva14g00401 14 1979898 1982291 ECH
Bva13g00324 13 1518482 1520532 Bva14g00401 14 1979898 1982291 ECH
Bva06g02115 06 13996180 13999287 Bva14g00401 14 1979898 1982291 ECH
Bva10g00690 10 5775757 5779465 Bva14g00401 14 1979898 1982291 ECH