Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01310 ATGGAAAATTTCATGGGTTTGCTCAGGATTCATGTCGAGAAGGGGGAGAATCTCGCTGTCAGGGATGTTGTAAGCAGCGACCCTTATATTATCATCAAAATGGGAAAGCAGAAATTGAAGACTCGGGTTGTGAACCAGAATATCAATCCTGAATGGAATGATGATTTGACTTTATCCATTACAGACCCTAATCTTCCTGTTCAACTTTTTGTGTATGACAAAGACAGATTTAGCTTGGATGACAAAATGGGGGATGCTGAGTTTGATATCAACCCATTTCTGGAAGCCTTAAGGATGCATTTGGAGGGTGTTCCAGATGGAACCATCATCACAAGAATACAACCAAACAGGCAAAACTGCCTGGCAGAGGAGAGCCAAATTGTGTTGCAGAATGGCAAAGTTGTGCAGAAAATGTTTCTCAGACTCAGAAATGTGGAATCTGGGGAAGTCAAGCTGCAACTGCATTGGATTGACATCCCTGGTTCCAAGGGTCTCTA 497 0.4266 MENFMGLLRIHVEKGENLAVRDVVSSDPYIIIKMGKQKLKTRVVNQNINPEWNDDLTLSITDPNLPVQLFVYDKDRFSLDDKMGDAEFDINPFLEALRMHLEGVPDGTIITRIQPNRQNCLAEESQIVLQNGKVVQKMFLRLRNVESGEVKLQLHWIDIPGSKGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01310 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bva13g01310 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Bva13g01310 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Bva13g01310 165 Gene3D C2 domain 4 161 IPR035892 -
Bva13g01310 165 Pfam C2 domain 6 93 IPR000008 -
Bva13g01310 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Bva13g01310 165 CDD C2_ArfGAP 6 148 - -
Bva13g01310 165 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01310 Bva-Chr13 6728354 6730046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01310 38 165 C2H2 Transcription Factor Family AT1G70790 63.077 2.70e-54 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01310 13 6728354 6730046 Bva13g01310 13 6728354 6730046 ECH
Bva13g01310 13 6728354 6730046 Bva04g00616 04 4063904 4069184 ECH
Bva01g01560 01 17036520 17038695 Bva13g01310 13 6728354 6730046 ECH
Bva11g00613 11 9528266 9530183 Bva13g01310 13 6728354 6730046 ECH