Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01151 ATGTTGAGCAACTGTGAGAAATTGCTACTCATCCCTCCAACGACTAACGAATGGCCACAACCACAACAGATTACTCATTCAGATGATCAAAAGGTCTCGATGGCTTCTTCCACTGGTGGTAGGGTAATGGAAAAACCAGGCCAAGAGCTTCTTCAGCAGCAACAACAAGCTTTGAAGTGCCCTCGTTGTGATTCATCCAACACAAAGTTCTGCTACTACAACAACTACAGCTTGTCTCAACCAAGGCACTTCTGCAAAGCCTGCAAGAGATACTGGACAAGAGGAGGAACCCTGAGGAATGTTCCTGTTGGCGGTGGTTGCAGAAAAAACAAGCGTGTGAAAAGACCAATTTCATCTTCTGCCATTGATGCTCCTGCTTctgctccttcttcttcttcttcagctcCTAGTGCCAATTCAAACCCCGTTTCGCAACCCCAGATcgatatttcttcttcttcaaatcaCATGAATCCTTTATTTTATGGGTTAACTAGTACCTCTTGTGAGATGAATCTTCCATTTCCAAGGTTCAACTCTAGGGTGGAAACTATTTCTGGGTATGATCATCTTCAATCTCAGCTAAATGATATTGGGTTAGGTTATTCTTCTGGGGTTATGTCTAATGGAGCTAATGATAATGGTTATAGAAATGggttttcttcaaataatgCTCTTCTTTCAAGTTACTCCATCTTTGGTGGTTCTTCGTCGAGCTCTACACCAACCACTCCAATTATGGCTTCTCTGTTGAGCTCGACTCTGCAGCAAAAGTTCACCAATGGTGGTGTGAAAGATGCAGCAAATATTTTCCATGGTTTTGCACCTCTAGAAGAGATGAATAACAGCGAAGCAGATGCAGAGATGGTGGGTTTAAAAGAAGTGAAAGTTGAAGGAGGAGGACAAAACAGGTTTGAGTCATGGAATGGTGCTTGCCAAAACCAGATGGATCAGCATGTGGGCTTGTCTGATCCTTCTTCGCTTTATTGGAATGCAGCATCAACGGCCATGGGAGGTGCTTGGAATGATCCAACAAATATTGGCCCTTCAGTCACTTCTCTGATCTA 1067 0.4096 MLSNCEKLLLIPPTTNEWPQPQQITHSDDQKVSMASSTGGRVMEKPGQELLQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPISSSAIDAPASAPSSSSSAPSANSNPVSQPQIDISSSSNHMNPLFYGLTSTSCEMNLPFPRFNSRVETISGYDHLQSQLNDIGLGYSSGVMSNGANDNGYRNGFSSNNALLSSYSIFGGSSSSSTPTTPIMASLLSSTLQQKFTNGGVKDAANIFHGFAPLEEMNNSEADAEMVGLKEVKVEGGGQNRFESWNGACQNQMDQHVGLSDPSSLYWNAASTAMGGAWNDPTNIGPSVTSLI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01151 355 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 2 339 - -
Bva13g01151 355 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 339 IPR045174 GO:0003700|GO:0006355
Bva13g01151 355 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Bva13g01151 355 MobiDBLite consensus disorder prediction 123 152 - -
Bva13g01151 355 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Bva13g01151 355 MobiDBLite consensus disorder prediction 103 152 - -
Bva13g01151 355 Pfam Dof domain, zinc finger 56 112 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01151 Bva-Chr13 5730601 5731890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01151 58 355 C2C2-Dof Transcription Factor Family AT1G28310 41.720 7.06e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva13g01151 zf-Dof 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01151 - - tcc:18596816 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01151 13 5730601 5731890 Bva13g01151 13 5730601 5731890 ECH
Bva13g01151 13 5730601 5731890 Bva14g01399 14 6967727 6969767 PCT