Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01150 ATGCAGCAAGGAGATGATGGCAGGGGAGCTGGGGAAGGGGAAGGAGGAGGCGTGGTGGGTAATCAAGATCGGAGATCGAAGGCTGCGCACGGCGGAGATGGTGGGCAGGGCCAGCTGCAGcggcagcagcagcagccGCAGAAATGTCCTCGCTGTGAATCTGCCAACACGAAGTTCTGTTACTACAATAACTATAGCTTGTCGCAGCCCAGGTACTTCTGCAAAACGTGTAGAAGGTATTGGACCCAAGGCGGCACCTTGAGGAACGTACCGGTTGGTGGCGGTTGCCGGAAGGGAAAGCGCGCCAAAACTGCTGCTTCCTCTTCCACAATCACCGGCGAGACTTCCTCTCGGTCTCTGCCGCAAGAGGTGGTGGGTCAACCGCAGCCAGTGAGACCCAATATCATAACCTCCGACCACCCTGCTATAATATCTACTAAAGACCTCTCTTCCGCCTTGGTTTCTCCGGCGCCGGCTCTCGGAATCAGCCCTTATTATCAGAGCACTGCTGGTGGTGGTCGTGGTGGTGGTGGGTTTTTATCTTCTCTGGCAGCGATTCAGCTAAACCCATCACAACCCAGTTTCAATCAGGGTCTCAATGTTGGAACCGATGCTAtggtttcttcaaatttgggTCTTTTAACTGGGTTCAATGTTGCTTCTCTTGGCCCTCCACACCAAATTCGTCCACCCTCGCAATTTTTCCAAATGGGtaacagagaaagagaggtgGAAGCTCTGTTTCCAGCAGAACAACGAGGTTTGGTTCAATCAACAATGGCAACTCATAACAGCACTGGAGTTCCTCACCATGATTGGTCTCAAAGCTTCATCACTAATGCAAATGACCATAGGACCCCTGGCGATGGCTCATTTTGGAGCACTATCAGCACAAGTTCCATCAGTGGCAATTCTGAGAGCAATGCAAATTCTGGGTCTTCTTCTCTGTTTCCAAACCGGTGGCCTGATCTCCCAGGCTATGGCCCTCCACCATG 995 0.4945 MQQGDDGRGAGEGEGGGVVGNQDRRSKAAHGGDGGQGQLQRQQQQPQKCPRCESANTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKTAASSSTITGETSSRSLPQEVVGQPQPVRPNIITSDHPAIISTKDLSSALVSPAPALGISPYYQSTAGGGRGGGGFLSSLAAIQLNPSQPSFNQGLNVGTDAMVSSNLGLLTGFNVASLGPPHQIRPPSQFFQMGNREREVEALFPAEQRGLVQSTMATHNSTGVPHHDWSQSFITNANDHRTPGDGSFWSTISTSSISGNSESNANSGSSSLFPNRWPDLPGYGPPP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01150 331 Pfam Dof domain, zinc finger 45 101 IPR003851 GO:0003677|GO:0006355
Bva13g01150 331 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Bva13g01150 331 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Bva13g01150 331 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 330 IPR045174 GO:0003700|GO:0006355
Bva13g01150 331 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 17 330 - -
Bva13g01150 331 MobiDBLite consensus disorder prediction 299 331 - -
Bva13g01150 331 MobiDBLite consensus disorder prediction 96 133 - -
Bva13g01150 331 MobiDBLite consensus disorder prediction 1 48 - -
Bva13g01150 331 MobiDBLite consensus disorder prediction 299 318 - -
Bva13g01150 331 MobiDBLite consensus disorder prediction 103 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01150 Bva-Chr13 5717431 5718426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01150 48 112 C2C2-Dof Transcription Factor Family AT5G60200 75.385 3.24e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva13g01150 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01150 - - qsu:112029439 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01150 13 5717431 5718426 Bva13g01150 13 5717431 5718426 ECH
Bva13g01150 13 5717431 5718426 Bva14g01398 14 6957209 6959227 PCT