Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01101 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTAGTGGCCTTGATTGGAACCAGAAGTTGTCGAAAGCTCAAGACTTGGAGCTGCCAAAGCCTTCTCCTTGCCCGGTGAggaaacaacaacaacagcaacagcaacaaACGCAGCAGCAATCAGAGGCTTTGAAGTGCCCAAGATGTGATTCTACCAACACCAAATTTTGCTACTACAACAACTACAACAGGTCACAGCCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACAAAGGGGGGAACTTTACGCAATGTTCCGGTCGGCGGTGGCCGGAAAAACAAAAGGGTCAAGAAATCAACCAATGCAACCTCTtctaccaccaccaccacttcTGCCTCTACAACTACCGTGGCCACCACCACTGCAATTGGCAGTTTGGATATAGGGTTGAACTTGAATACCCACATGACAATTCATCCTCATGAGCAAAGACAGAGTCTTTCTCTTGCAGTGGGTGATCAGAAAAACATGCCTCCCTCTGTCTATCAAACTCTGATGCGTCCACCATCTCTGGTTCCACCGCACAATCATCTGATCAATACCAGAGACTTAGAAAGCAAAGCTTTGGGCTTTCTGGGTTCAACAACTCTGCCTCTTGATCACAATCAAAACTTGCACTTTCCCTTCTCATCCTCAGCCTCTTTTGACACAAACCCATGTTCAGTTTCAACCTCTTTGAGATCTTCCAGTGTTTATGACTATGGGGAAGATCTCAAAACAATGGAGGAGCCAACCATCAACAGCCTATTGACCTGCACAAGTGGCACTAACACACAGCCATGGGAGATGCCTGCAACAAGTGGAGGCATGGAAATGTCAAACTATTGGAATTGGGAGGATTTGGATTCTTTGGTCTCAACTGATATAAATGTTCCATGGGAGGATTCTGATTTAAAGccctg 935 0.4353 MGLSSKQVSSSGLDWNQKLSKAQDLELPKPSPCPVRKQQQQQQQQTQQQSEALKCPRCDSTNTKFCYYNNYNRSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTNATSSTTTTTSASTTTVATTTAIGSLDIGLNLNTHMTIHPHEQRQSLSLAVGDQKNMPPSVYQTLMRPPSLVPPHNHLINTRDLESKALGFLGSTTLPLDHNQNLHFPFSSSASFDTNPCSVSTSLRSSSVYDYGEDLKTMEEPTINSLLTCTSGTNTQPWEMPATSGGMEMSNYWNWEDLDSLVSTDINVPWEDSDLKP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01101 311 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Bva13g01101 311 PANTHER OS06G0284500 PROTEIN 39 227 - -
Bva13g01101 311 MobiDBLite consensus disorder prediction 97 122 - -
Bva13g01101 311 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Bva13g01101 311 Pfam Dof domain, zinc finger 51 105 IPR003851 GO:0003677|GO:0006355
Bva13g01101 311 MobiDBLite consensus disorder prediction 1 53 - -
Bva13g01101 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 227 IPR045174 GO:0003700|GO:0006355
Bva13g01101 311 MobiDBLite consensus disorder prediction 34 53 - -
Bva13g01101 311 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01101 Bva-Chr13 5434500 5436178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01101 53 109 C2C2-Dof Transcription Factor Family AT1G28310 84.483 3.12e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva13g01101 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01101 - - gmx:778119 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01101 13 5434500 5436178 Bva14g01330 14 6575722 6577337 PCT