Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00327 ATGGCAATCCACCATCCCAATGAACCACTGCTAGAACACCATGAAAATGCTTCATTTTTCCTGGATGCTCTGTACTGTGATGAGGAAAGAtgggaggaggaggaggaagaatGCATTGGAGAGTtaacagaagaaaaatctGATGTGACTAACGATGaatctcttcttcctttgctCTTGTTGGAGCAAGATTTCTTCTGGGAAGATGAAGAGCTACactctctcttcttcaaaGAACAGAAACAGCAAGAAGAAGCCTATTCAAATCTGGATAATGTGGATTTCTTACACTCTACTCTCTCCGTGGCTCGTCGTGAGGCAGTGCAATGGATGCTCAAAGCCAATGCCCATTATGGGTTTACAACTCTCACTGCCACACTTGCCATAAATTATCTGGATAGATTCCTTTTGAGCTTCCATTTTCAAAGGGAGGAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCCTTGCTCTGGCTGCAAAAGTTGAAGAGATTCAAGTGCCCCCTCTTCTAGAGCTCCAAGTTGAGGATGCAAAACCCATCTTTGAAGCTAAAATTATTCAGAGAATGGAGCTGCTGGTGCTTTCTTCTCTCAAGTGGAAGATGCACCCGGTGACCCCACTCTCATTTCTAGATCACATTATTAGGAGGCTTGGATTGAAAACCCATCTTCATTGGGAATTCCTCAGGCGCTGCGagcatcttcttctttctgttcTTTCAGATTCAAGATTTGTTGCTTGTCTTCCTTCTGTGGTGGCCACTGCGACAATGCTGCACGTTATCGACCAGATTGAGCAGGACGATGGGGTGGAATACAAAAAGCAGCTTCTTGGTGTTTTGAAAATTAGCAAGGAGAAAGTAGATGAATGCTATAATCTAATCCTTGAGCTCTCGCACGCCAATAATTATGGTCATAACAACCCTCGTAAGCGTAAGTACGATAAAACCCCAGGCAGCCCAAGTGGCGTAATTGATGCTGTTTTTAGCTCTGATGCTTCCAACCATTCGTGGACAATGGGGTCATCTCTATATTCATCTTCACCAGAGCCTCTGCTAAAAAAAAGCAGAGCCCAagagcagcagcaacaacaacaaatgaAATTGTCACCGCTCAACCGGGTCATTGTTGGAATAGTTGGCACCTCTCCTTA 1157 0.4036 MAIHHPNEPLLEHHENASFFLDALYCDEERWEEEEEECIGELTEEKSDVTNDESLLPLLLLEQDFFWEDEELHSLFFKEQKQQEEAYSNLDNVDFLHSTLSVARREAVQWMLKANAHYGFTTLTATLAINYLDRFLLSFHFQREEPWMIQLVAVTCLALAAKVEEIQVPPLLELQVEDAKPIFEAKIIQRMELLVLSSLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLSDSRFVACLPSVVATATMLHVIDQIEQDDGVEYKKQLLGVLKISKEKVDECYNLILELSHANNYGHNNPRKRKYDKTPGSPSGVIDAVFSSDASNHSWTMGSSLYSSSPEPLLKKSRAQEQQQQQQMKLSPLNRVIVGIVGTSP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00327 385 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Bva13g00327 385 CDD CYCLIN 104 196 IPR013763 -
Bva13g00327 385 SMART Cyclin_C_2 206 334 IPR004367 -
Bva13g00327 385 SUPERFAMILY Cyclin-like 207 316 IPR036915 -
Bva13g00327 385 Gene3D - 99 204 - -
Bva13g00327 385 PANTHER CYCLINS 41 358 IPR039361 -
Bva13g00327 385 Pfam Cyclin, N-terminal domain 82 203 IPR006671 -
Bva13g00327 385 Gene3D - 205 294 - -
Bva13g00327 385 Pfam Cyclin, C-terminal domain 206 316 IPR004367 -
Bva13g00327 385 SMART cyclin_7 109 197 IPR013763 -
Bva13g00327 385 PANTHER CYCLIN D3.1 PROTEIN 41 358 - -
Bva13g00327 385 SUPERFAMILY Cyclin-like 67 204 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00327 Bva-Chr13 1534512 1536517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00327 1 299 Core Cell Cycle Gene Families AT4G34160 56.187 2.93e-111 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00574 08 2957745 2959679 Bva13g00327 13 1534512 1536517 BWGD
Bva13g00327 13 1534512 1536517 Bva13g00327 13 1534512 1536517 ECH
Bva13g00327 13 1534512 1536517 Bva14g00405 14 1995264 1997340 ECH
Bva06g02120 06 14019081 14021032 Bva13g00327 13 1534512 1536517 ECH
Bva10g00685 10 5752452 5754587 Bva13g00327 13 1534512 1536517 ECH