Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00324 ATGGGGTGCAATGGGGGTCTCATGGATTATGCTTTTGAATTTATCATGAAAAATGGAGGCATTAATATGGAAGAGGACTACCCCTACCATGCTCGTGATGGTTGTTGTGATCCCAACAGGAAAAAAGCTAAAGTTGTCAGCATTGATGGGTTTGAAGATGTTCCTGAAAATGACGAGAAATCCTTGCAGAAGGCAGTGGCAAACCAACCAGTTAGCGTTGCTATTGAAGCTGGTGGCAGAGCTTTCCAACTTTATGAATCAGGCGTTTTCACTGGGCTCTGTGGAACAGAACTTGATCACGGTGTATTGGCAGTTGGATATGGAACAGAAAATGGTAGAGATTACTGGTTGGTAAAGAACTCTTGGGGTCCCAATTGGGGAGAGGGTGGTTACATCAAGCTAGAGCGTAATGTGAATAACAAGAGTGGAAAATGTGGGATAGCAATAGAGGCATCATACCCAGTGAAGAAGGGTCAGAATCCCCCAATGCCCAGTCCTTCCTCTCCATCTCGGTCTCCACCTCCTGTAAAGCCTTGGACAGTTTGCGACGATTACTACTCTTGCCCAGCCGGAACCACTTGCTGCTGCCTTTATGAGTATCAAGGCTACTGCTTTGGATGGGGATGCTGCCCTCTTGAATCTGCAACTTACTGCGATGATCATCGAAGTTGCTGCCCTCGTGATTTCCCTATCTGTGATACTCATGCCAGAATCTGCCGAGTgAGCAAGGACAATCCATTTGGAATGAAAGTTTTTAGAAGAACTCCTGCAAAGAGAATTAGCCGGAAAACTCCTGTTGCATG 803 0.4595 MGCNGGLMDYAFEFIMKNGGINMEEDYPYHARDGCCDPNRKKAKVVSIDGFEDVPENDEKSLQKAVANQPVSVAIEAGGRAFQLYESGVFTGLCGTELDHGVLAVGYGTENGRDYWLVKNSWGPNWGEGGYIKLERNVNNKSGKCGIAIEASYPVKKGQNPPMPSPSSPSRSPPPVKPWTVCDDYYSCPAGTTCCCLYEYQGYCFGWGCCPLESATYCDDHRSCCPRDFPICDTHARICRVSKDNPFGMKVFRRTPAKRISRKTPVA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00324 267 SUPERFAMILY Granulin repeat 180 213 - -
Bva13g00324 267 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 115 134 IPR025661 -
Bva13g00324 267 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 187 - -
Bva13g00324 267 Gene3D Granulin 180 242 IPR037277 -
Bva13g00324 267 SUPERFAMILY Cysteine proteinases 1 156 IPR038765 -
Bva13g00324 267 SMART pept_c1 1 155 IPR000668 GO:0006508|GO:0008234
Bva13g00324 267 PANTHER CYSTEINE PROTEASE 1 187 - -
Bva13g00324 267 MobiDBLite consensus disorder prediction 155 174 - -
Bva13g00324 267 CDD Peptidase_C1A 2 154 IPR039417 -
Bva13g00324 267 Pfam Granulin 193 239 IPR000118 -
Bva13g00324 267 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 98 108 IPR025660 -
Bva13g00324 267 Pfam Papain family cysteine protease 2 155 IPR000668 GO:0006508|GO:0008234
Bva13g00324 267 SMART GRAN_2 182 239 IPR000118 -
Bva13g00324 267 Gene3D Cysteine proteinases 1 157 - -
Bva13g00324 267 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00324 Bva-Chr13 1518482 1520532 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00324 13 1518482 1520532 Bva13g00324 13 1518482 1520532 ECH
Bva13g00324 13 1518482 1520532 Bva14g00401 14 1979898 1982291 ECH
Bva06g02115 06 13996180 13999287 Bva13g00324 13 1518482 1520532 ECH
Bva10g00690 10 5775757 5779465 Bva13g00324 13 1518482 1520532 ECH