Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00803 ATGATGATGTTTGAAGATATGGCCTTTTGTGGCGACTTGGATATGATATCTGCTCCTCTCGGGGAAGGGGATGTTGCAGCCCGGCAAAATGAACCAGAGGCTGCTGTTGAAGATGACTACAGCGACGAGGAAATTGATTTGGATGAGCTCGAGAGGAGGATGTGGAGGGACAAAATGCGGCACAAGCGGCTGAAAGAACAAAGCAAGGCTAAGGAGGGAATTGATTCGGCCAGGCAAAGGCAGTCCCAAGAACAGgcaaggaggaagaagatgtCCAGGGCTCAAGATGGCATCCTAAAATACATGCTCAAAATGATGGAGGTCTGCAAGGCCCAGGGATTTGTTTATGGGATTATTCCTGAGAAGGGAAAGCCTGTTACTGGGGCATCTGACAATCTTCGTGAATGGTGGAAGGACAAAGTCAGATTTGACCGAAATGGTCCGGCTGCCATAGCCAAGTACCAGGCAGATAATGCAATCCCTGGGAAGAATGATGGATGTAATGCAATTGGTCCAACTCCACACACCTTGCAAGAGCTCCAGGACACAACCTTGGGCTCTCTCTTGTCTGCTCTCATGCAGCACTGTGATCCCCCTCAGAGACGGTTTCCGTTAGAAAAAGGTCTTCCGCCACCATGGTGGCCCACTGGGAATGAGGAATGGTGGCCTCAAATTGGTTTGCCTAAAGACCAAGgtcctccaccatacaagaAACCTCACGACCTCAAGAAGGCATGGAAGGTTGGTGTTCTGACTGCTGTTATCAAGCATATGTCTCCTGATATTGCTAAGATCAGGAAGCTTGTGAGGCAATCCAAATGCCTGCAAGATAAAATGACTGCAAAGGAGAGTGCAACCTGGCTTGCCATCATCAATCAGGAGGAGGCCTTGGCCCGGGAGCTTTACCCGGATTATCGCCCCCCATTATCCTCAGCTGGAGGTAGTGGCTCTTTGGTCATCAATGATTGCAATGAGTATGATGTTGAAGGAGTTGATGACGAGTCAAACTATGATGTGGAAGATCGGAAACCTGAAAATCTTAACCCATCCAATCTTGGAATGGACAGAATGAATGGAAGACTACCAATTCAGCAATCCTCTTATCCAATCAAGGGAGAAATTGTCACAAACTTGGATTTCATTCGGAAGAGGAAGATGTCCAGCGACTTCAACATGATGATGAATCAGAAGATCTACACATGTGAAAATCCTCAGTGTCCCTACAATGAATTTCGCCTTGGTTTTCAAGACATGACTTCTAGGGACAATCATCAGTTGAACTGCCCATATAGAATCAATGCTGCAGATTACTCTGGGCCAAATTTTCATGTCAATGAAGTAAAGCCAGTCATATTCCCTCAATCATTTGTCCAACCCAAGCCACCTGCTCCATCTGTTAATCTAGTTCCTCcttcatttgatttatctGGTCTTGGAGTTCCTGAAGATGGACAAAAGATGATTAGCGACCTCATGTCCGTCTATGACACAAATGTTCAAGTTAACAAGAAGAGGGCAAGTTCCAGTAACCGTGTAGCTGCTGAATCTCAAAATCTTCCCCGTCATCCAAACGTTCAACAGCAACAGGAAAACTTCTTTCATGGACAAGCGATGGTGATGGACGGAAACTTCTTTGAAGAACCAAACATGTCCAGTAATCATCAACCCGTTTTTGCAAGGGATGAGAGTCAATTTGACCGATTTAAGTCTATGAATTCTCCATTTGACACCAACCACAACACCGGTAACTTCCAAATGATGTTTGGTCCCCACTGTGACTTGCCATCCTTTGATTACAAGGATGATTTAAATGGGGTGGGGATGGACACAGTGCAGAAACAAGCAGATGTCTCAATATGGTACCAGTG 1868 0.4465 MMMFEDMAFCGDLDMISAPLGEGDVAARQNEPEAAVEDDYSDEEIDLDELERRMWRDKMRHKRLKEQSKAKEGIDSARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGLPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYRPPLSSAGGSGSLVINDCNEYDVEGVDDESNYDVEDRKPENLNPSNLGMDRMNGRLPIQQSSYPIKGEIVTNLDFIRKRKMSSDFNMMMNQKIYTCENPQCPYNEFRLGFQDMTSRDNHQLNCPYRINAADYSGPNFHVNEVKPVIFPQSFVQPKPPAPSVNLVPPSFDLSGLGVPEDGQKMISDLMSVYDTNVQVNKKRASSSNRVAAESQNLPRHPNVQQQQENFFHGQAMVMDGNFFEEPNMSSNHQPVFARDESQFDRFKSMNSPFDTNHNTGNFQMMFGPHCDLPSFDYKDDLNGVGMDTVQKQADVSIWYQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00803 622 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Bva12g00803 622 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Bva12g00803 622 MobiDBLite consensus disorder prediction 58 91 - -
Bva12g00803 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 621 - -
Bva12g00803 622 Coils Coil 33 67 - -
Bva12g00803 622 Pfam Ethylene insensitive 3 48 295 IPR006957 GO:0005634
Bva12g00803 622 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Bva12g00803 622 MobiDBLite consensus disorder prediction 334 356 - -
Bva12g00803 622 MobiDBLite consensus disorder prediction 66 91 - -
Bva12g00803 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 621 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00803 Bva-Chr12 9230769 9234057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00803 2 621 EIL Transcription Factor Family AT3G20770 61.315 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Bva12g00803 EIN3 4.6e-130 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00803 12 9230769 9234057 Bva12g03004 12 21462131 21465453 BWGD
Bva12g00803 12 9230769 9234057 Bva12g00803 12 9230769 9234057 ECH