Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01745 ATGAAGAAGATGGCTCTCAGAGAAGAAGCACAAGATGTAGAAAACTCTTCGTTAGTACTTGATGCGCTCCTCTGTGAAGAAGATAGTTTCGAGGaagatttttgtgaaaatggtATTGAGAGAGAGCGTTATGATTCAACTGTGAGAAAGTCGTCATCTTTGCCTTTGATTTTGTTAGATAACGACTTGTTCTGGGAAGACGATGAACTCGTCTCCCTAATCTCCAAAGAGGGAGAGACCCATTTCTGCTTCAGTAATCTAATTGAAGAAGGACCTCTAAAGGGAACTCGTGTTGATGCTGTGCGATGGATTTCTAAAGTTTGTTCGCACTATGGTTTCTCTGCTTTGACGACCGTTCTCGCTGTGAACTACTTTGATAGGTTCATTACAAGCCAAAGGTTTCAGAGGAATATGCCATGGATGACACAGCTTACTGCAGTTTCCTGTTTATCTCTGGCTGCCAAAGTAGAGGAGACCCAAGTGCCACATCTTTTGGACTTGCAAGTGGAGGAATCGAAGTACATTTTTGAAGCCAAAACTATACAGAGAATGGAGCTCCTAGTGCTATCAACTCTTAAATGGAGGATGAATCCAGTGACCCCAATTTCCTTCTTCGAACACATTGTGAGAAGACTCGGTTTGAAGTGCCGCTTGCATTGGGAGTTCCTGTGGGAGTGCGTGCGTGTTCTTCTCTTTGTCATTGTGGATTCACTGGTTATGAGTTATCGCCCTTCTATATTAGCTGCTGCTATAATGAGCCACGTTATTAGAGAGATTGAGCCAAGTAAGGCAATGGACTACAGAAATCAGCTTCTCAGTTTACTCAAGATCAGTGAGGAACAAGTGACCGAGTGCTACAAACTCATACTGAAACTATTAGGATGCCGGGACGACATTCCAAATCTTCACCAGAAACGCAAGCGCCTATCTGCACCAAGTAGCCCGAGTGGCGTCACTGATGCATCTTTCAGCGACGAGAGCTCAAATGACTCGTGGGCTGTGGCATCATCAGTCTCGTTTTCACTGGAGCCAGTGTTAAAGAGGAGCAGAGTTCAGGAACAGAAGATGCGCCTGCGTTCCCTAAATCATGTTTCTGTTGATGTGTTTAATAGCCCTCGTTA 1121 0.4389 MKKMALREEAQDVENSSLVLDALLCEEDSFEEDFCENGIERERYDSTVRKSSSLPLILLDNDLFWEDDELVSLISKEGETHFCFSNLIEEGPLKGTRVDAVRWISKVCSHYGFSALTTVLAVNYFDRFITSQRFQRNMPWMTQLTAVSCLSLAAKVEETQVPHLLDLQVEESKYIFEAKTIQRMELLVLSTLKWRMNPVTPISFFEHIVRRLGLKCRLHWEFLWECVRVLLFVIVDSLVMSYRPSILAAAIMSHVIREIEPSKAMDYRNQLLSLLKISEEQVTECYKLILKLLGCRDDIPNLHQKRKRLSAPSSPSGVTDASFSDESSNDSWAVASSVSFSLEPVLKRSRVQEQKMRLRSLNHVSVDVFNSPR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01745 373 SUPERFAMILY Cyclin-like 181 299 IPR036915 -
Bva11g01745 373 PANTHER CYCLIN-D3-2 5 357 - -
Bva11g01745 373 Pfam Cyclin, N-terminal domain 95 197 IPR006671 -
Bva11g01745 373 Gene3D - 95 197 - -
Bva11g01745 373 PANTHER CYCLINS 5 357 IPR039361 -
Bva11g01745 373 SMART Cyclin_C_2 199 327 IPR004367 -
Bva11g01745 373 Gene3D - 198 287 - -
Bva11g01745 373 MobiDBLite consensus disorder prediction 307 328 - -
Bva11g01745 373 CDD CYCLIN 96 189 IPR013763 -
Bva11g01745 373 MobiDBLite consensus disorder prediction 306 328 - -
Bva11g01745 373 Pfam Cyclin, C-terminal domain 199 296 IPR004367 -
Bva11g01745 373 SUPERFAMILY Cyclin-like 64 197 IPR036915 -
Bva11g01745 373 SMART cyclin_7 102 190 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01745 Bva-Chr11 15642013 15643651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01745 4 363 Core Cell Cycle Gene Families AT5G67260 50.267 1.24e-109 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01745 11 15642013 15643651 Bva08g00574 08 2957745 2959679 BWGD
Bva08g00574 08 2957745 2959679 Bva11g01745 11 15642013 15643651 ECH
Bva06g02120 06 14019081 14021032 Bva11g01745 11 15642013 15643651 ECH
Bva10g00685 10 5752452 5754587 Bva11g01745 11 15642013 15643651 ECH
Bva11g01745 11 15642013 15643651 Bva11g01745 11 15642013 15643651 ECH