Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01740 ATGGCTGCAATGGCAATATCCACTTTACTCTTCCTTTCGTTCATTTCATCAGCATTCGCTTTGGATTTGTCCATCACCAGTAACACTCACCACCACGTCGATGTCAACCATTCCAATTGGCGAAGCGAAGAGGAGGTCATGTCCATTTATGAGGCGTGGCTGGTTAAGCACCAGAAAGTGTATAACGCTTTGGGAGAGAAGAATAAGAGGTTCCTAGTTTTTAAGGATAATTTGAGGTTCATTGATGAGCATAATGCTCAAAATCGCACATACAAACTTGGGTTGAACAGTTTTGCTGATTTAACTAACGAGGAATACCGTGCTAAGTATTTTGGCACAAGACCTGATCCTAAGCGCATCGTCATGAAAGCCAAGAACTCCGGTCACCGATATGCTTACAACGCAGGCGATAAGTTGCCGGTGCACGTCGATTGGAGGGTCAAGGGTGCCGTTAGTCCAATCAAAGATCAAGGAAGTTGCGGAAGTTGTTGGGCGTTCTCGACGGTGGCTGCAGTGGAAGCCATAAATAAGATAGTCACCGGCGAGCTTGTCTCTTTGTCCGAACAAGAACTCGTGGACTGCGACACATCCTACGATAATGGATGCAACGGGGGTCTTCCAGACCACGCCTTTGAGTTCATCATTGGAAATGGCGGCATCGACACAGACGATGACTACCCTTACTTGGGTGTTGATGGCAAATGTGATCAAACTAGGAAGAATACTAAGGTAGTGAGCATTGATGGGTACGAGGATGTTCCAGTATTTGATGAGAATGCGTTGAAGAAAGCCGTGGCTCACCAGCCTGTGAGCGTTGCCATTGAAGCCGGTGGAAGGGCTTTGCAACTCTACCAGTCGGGTGTCTTCACTGGTGAATGTGGGGCAGAATTAGACCATGCTGTGGTTGCTGTTGGATATGGAACTGAAAGTGGTGTTGATTATTGGCTGGTGAGGAACTCATGGGGCACTGGCTGGGGTGAGAATGGTTACATCAGGATTGAGCGTAATGCCAACACTTACACCGGAAAGTGTGGAATTGCAATGCTGGCCTCATACCCTGTTAAGAATGGCCACAACTCTGCAAATCCCACAGAAGTGAAGATTAGCAGTGCTTG 1115 0.4744 MAAMAISTLLFLSFISSAFALDLSITSNTHHHVDVNHSNWRSEEEVMSIYEAWLVKHQKVYNALGEKNKRFLVFKDNLRFIDEHNAQNRTYKLGLNSFADLTNEEYRAKYFGTRPDPKRIVMKAKNSGHRYAYNAGDKLPVHVDWRVKGAVSPIKDQGSCGSCWAFSTVAAVEAINKIVTGELVSLSEQELVDCDTSYDNGCNGGLPDHAFEFIIGNGGIDTDDDYPYLGVDGKCDQTRKNTKVVSIDGYEDVPVFDENALKKAVAHQPVSVAIEAGGRALQLYQSGVFTGECGAELDHAVVAVGYGTESGVDYWLVRNSWGTGWGENGYIRIERNANTYTGKCGIAMLASYPVKNGHNSANPTEVKISSA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01740 371 Pfam Papain family cysteine protease 139 353 IPR000668 GO:0006508|GO:0008234
Bva11g01740 371 CDD Peptidase_C1A 140 353 IPR039417 -
Bva11g01740 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Bva11g01740 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Bva11g01740 371 Gene3D Cysteine proteinases 20 356 - -
Bva11g01740 371 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 361 - -
Bva11g01740 371 SUPERFAMILY Cysteine proteinases 42 354 IPR038765 -
Bva11g01740 371 Pfam Cathepsin propeptide inhibitor domain (I29) 50 106 IPR013201 -
Bva11g01740 371 SMART Inhibitor_I29_2 50 106 IPR013201 -
Bva11g01740 371 SMART pept_c1 139 354 IPR000668 GO:0006508|GO:0008234
Bva11g01740 371 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Bva11g01740 371 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Bva11g01740 371 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Bva11g01740 371 PANTHER CYSTEINE PROTEASE 30 361 - -
Bva11g01740 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01740 Bva-Chr11 15610696 15612496 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00580 08 2988983 2991014 Bva11g01740 11 15610696 15612496 ECH
Bva06g02115 06 13996180 13999287 Bva11g01740 11 15610696 15612496 ECH
Bva10g00690 10 5775757 5779465 Bva11g01740 11 15610696 15612496 ECH
Bva11g01740 11 15610696 15612496 Bva11g01740 11 15610696 15612496 ECH