Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00975 ATGTCGGAGGTTAAAGAACCGGCGATAAAGCTCTTTGGGAGGACGATTTCGTTGCCATTCAACCCCCAGAATTCTGCCAATGACTCTTCTCTTCCTGCTTCTGAAGATTGCTCTCTCAATAGTCCTATTTCATCTTCGTCTTCTCCGCGTGAAGAGAACTGTGAATTGAGAGAACCTCAAGCACGTGGGGATAAGGAACTATCACCAGGAAAAGAACTCACCTCAGTTCAAGAAGATGCTGCCTCACATCAAACTAGAGAGGATTTAAAGTCTCCCACAACATCTTCAGGCATTTTTGAGAACCCTAAGACTCCCTCAGCTGAAAGAGAGACGTCTTTACTGAAATCCTCTGATAATGGAGAGCAAAGTGAAACAAGTATTGGGCAAGAGAAGACTCTCAAGAAGCCTGACAAGATCCTTCCATGCCCACGATGCAATAGCATGGAtaccaaattttgttattacaACAATTACAACGTCAACCAGCCCCGCCATTTCTGTAGGAACTGTCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTAGGTGCTGGTCGCCGCAAGAACAAAAGCTCTTCTGCCTCTCATTATCATCACATAATGGTTCCTGAGCCCCTTCAAACACCAAAAGCCAATGTTGCCAATGGATTACATCCTGTTTTGGGAAATGGAGCTGCTTTTGTGACCTTTGGCACAGATTCTCCTCTTTGCGATTCCATGTCTTCTGTCTTGAACATTGGAGAGAAAGCACACAATGGTGTTCTAAATGGATTTCATCTACCTGATCAACAAAATAGTTACGCATATTTTGGCAGAGAACATAATCGGGAAGGTCACTCGGCTGGAGCTTCTGCTTCTGTCACAGCTTCAAATTCATCAGAGAAGCGAGCAAGTGCTGGCTTGCAAGAATCAGTGGACGAAAGTTATCAAGGTTTCCCTCCACAATTACCATGCTTCCCCAGTTCTCCATGGCCTTATCCATGGGGCTCGGCACAGTGGAACTCTCCTATGCCTTCACCTGCATTCTGCCCACCAGCTATTCCAGTGCCATTCTATCCCTCACCATCATATTGGGGTTGCACTCTACCAGCCTCGTGGAATATCCCATGTATGTCTCCACAATCTTCCGTGAGCCACTCTTCTTCTGGCTCTGGACCTAATTCACCCACCTTGGGAAAGCACTCAAGGGATGGAAACATCCTTAGTCCAGCCAACTCACAGAAAGACAAGCCTGACAAAGAGAGCAACAACAATTCAGAAAGCAATGTCTTGATCCCCAAGACACTGCGTATCAATGATCCCAGTGAAGCTGCAAAGAGTTCTATATGGTCAACACTAGGAATCAAGAATGAAAAGGGCAATTCTCTCAAGGGAGGAGGCTTTTTCAAGTCATTTCTATCCCAGGGAGATGACAATAATCACACCGTTGAAGCATCGCTGGTGTTGCAAGCCAACCCTGCAGCTTTGTCCCGGTCTCGTACCTTCCATGAGAGGACTTA 1508 0.4582 MSEVKEPAIKLFGRTISLPFNPQNSANDSSLPASEDCSLNSPISSSSSPREENCELREPQARGDKELSPGKELTSVQEDAASHQTREDLKSPTTSSGIFENPKTPSAERETSLLKSSDNGEQSETSIGQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCRNCQRYWTAGGTMRNVPVGAGRRKNKSSSASHYHHIMVPEPLQTPKANVANGLHPVLGNGAAFVTFGTDSPLCDSMSSVLNIGEKAHNGVLNGFHLPDQQNSYAYFGREHNREGHSAGASASVTASNSSEKRASAGLQESVDESYQGFPPQLPCFPSSPWPYPWGSAQWNSPMPSPAFCPPAIPVPFYPSPSYWGCTLPASWNIPCMSPQSSVSHSSSGSGPNSPTLGKHSRDGNILSPANSQKDKPDKESNNNSESNVLIPKTLRINDPSEAAKSSIWSTLGIKNEKGNSLKGGGFFKSFLSQGDDNNHTVEASLVLQANPAALSRSRTFHERT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00975 502 MobiDBLite consensus disorder prediction 87 127 - -
Bva11g00975 502 ProSiteProfiles Zinc finger Dof-type profile. 140 194 IPR003851 GO:0003677|GO:0006355
Bva11g00975 502 MobiDBLite consensus disorder prediction 376 431 - -
Bva11g00975 502 MobiDBLite consensus disorder prediction 51 72 - -
Bva11g00975 502 MobiDBLite consensus disorder prediction 281 308 - -
Bva11g00975 502 MobiDBLite consensus disorder prediction 13 132 - -
Bva11g00975 502 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 502 - -
Bva11g00975 502 MobiDBLite consensus disorder prediction 376 409 - -
Bva11g00975 502 MobiDBLite consensus disorder prediction 284 308 - -
Bva11g00975 502 Pfam Dof domain, zinc finger 137 194 IPR003851 GO:0003677|GO:0006355
Bva11g00975 502 ProSitePatterns Zinc finger Dof-type signature. 142 178 IPR003851 GO:0003677|GO:0006355
Bva11g00975 502 PANTHER CYCLIC DOF FACTOR 2 1 502 IPR045174 GO:0003700|GO:0006355
Bva11g00975 502 MobiDBLite consensus disorder prediction 17 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00975 Bva-Chr11 11629494 11632861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00975 4 500 C2C2-Dof Transcription Factor Family AT5G39660 40.000 5.97e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva11g00975 zf-Dof 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00975 - - zju:107429011 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00975 11 11629494 11632861 Bva11g00975 11 11629494 11632861 ECH
Bva11g00975 11 11629494 11632861 Bva06g01214 06 9425941 9428870 ECH
Bva11g00975 11 11629494 11632861 Bva05g00489 05 2393992 2396820 ECH
Bva11g00975 11 11629494 11632861 Bva04g00288 04 1751664 1755116 ECH
Bva08g01506 08 7922520 7926223 Bva11g00975 11 11629494 11632861 PCT