Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00937 ATGTTTTCTATCAGAAGAATTCTCCATTGTACCCCAAAATTTTGCATTCAAAGGAAATGTCTCAGTTATGTACCATATCACCCACCACCATTGGAACCTGCAGAGCTCCGTCCCACTTTCGACTCCTCCTTGCGCTCCATTTCTTCACACCCATCTTTCTATCTTCTGAGTATTTGCAGAAACATCGATTCTCTCAAGAAAGTTCACAGCTTGCTCCATGTTCATGGCATGACCGGTGACCTTCTCTGTGCTACCAAATTGGTTAGCCTCTATGGTTCTTTTGGGTTTGCTAAATATGCTCGCTTGGTGTTTGATCAGATGCCAAGCCCGGATTTTTATTCGTGGAAGGTGATGATTAGGTGGTACTTTTTGAATGATATGTATAGGGAGATTGTCCCCTTTTATGCCAGTATGAGGGCATCTGTTGAAGGGCTTGATGATGTTGTTTTCTCAATTGTACTGAAAGCATGTTGTGAATTGCGTGATCTTGTTCAAGGGAGGAAGGTTCATTGCCAAATTGTTAAAGCCAAGACTGCGGATAGCTTTGTGTTGACGATTCTTGTTGATATGTACTCTAAATGTGGAGAGGTTAGAAGTGCCCGTGAtgtatttgatgaaatttttgaTAGAAATGTCATCTCCTGGACTTCCATGATTGTAGCTTATGTACAGAATGATTGTGGGGAAGAAGGGTTGAGGTTGTTCAATAGAATGAGAGAAGGGTTGATTGCAGGCAATCAATTTACTGTAGGGAGCTTAGTCACGGCATGTGGGAAATTAGGATATCTACATCAAGGGAAGTGGGTTCATGgctatataattaaaaatggcaTTGAGCTCAATTCTTTCTTGACAACTTCTCTATTGGACACGTATGCTAAGTGTGGGGACATTAGGGATGCTCGTTCTGTATATGACGAGCTTTCAACTGCTGACCTTGTTTCTTGGACAGCGATGATTGTGGGATATACTCAGAGAGGTCAACCAGGCAAGTCATTGAAATTGTTCATGGATGGAAAAGGGACAGGCCTTTTGCCCAATTCTGTTACTATTGCAAGCTTGCTTTCAGCATGTGCTCAGTTAGGCAATAGAAGCGTGGGGAGATCACTTCATGCCCTAATAGTTGAGCTTGGTTTAGATAGTCCTACCGTGAGAAATGCTCTTGTTGACATGTATGCAAAGTGCCATATGATTGTTAATGCTCGTTACATATTTGAAACTACTATGGAGAAGGATGTAATCTCTTGGAACTCTATTATTTCCGGTTATGCACAGAGCGGTTCAGCATATGAAGCTCTTCAGCTCTTTCAACGGATGAGGTTAGCCTCATATGAATCGCCTGATGCAGTCACGCTGGTCAGTGTTCTCACAGCATGTACTTCACTTGGTGCTCTTCAGCTTGGTTCTTCTCTCCATGCTTTCTCTTTAAAGAATGGCCGTTTATCATCTAGCATTTATGTCGGCACAGCACTTTTGAACTTCTATGCAAAATGCGGGGATGCAAAATCAGCTCGTATGGTATTTGATGGCATGGGAGTGAAGAATACTGTTACATGGAGTGCAATGATTGGTGGCTGTGGCATGCAAGGTGATGGCAGTGGGTCCCTTGCACTCTTTCGGGATATGCTGAAGGAGGAATATGAGCCCAATGAAGTGGTCTTCACAACTATATTGACAGCTTGCAGCCATGCAGGAATGGTTGGAGAAGGCTGGTGGTTTTTCAATTTGATGTGTCAGGAACTGAATTTTGTTCCTTCCATGAAGCATTATGCATGCGTGGTTGATCTTTTGGCACGTGCTGGCAACCTTGAAGAGGCATTGGactttattaacaaaatgtCTATTCAACCTAATGTTAGTGTCTTTGGAGCATTTCTCCATGGATGTGGACTTCATTCAAGATTTGATTTAGGGGAAGTGGCAATCAGGAGAATGTTAGAGTTGCACCCACATGAAGCTTCATACTATGTGCTCATGTCAAACCTATATGCTTCAGATGGGAGATGGAGCCAGGTTAAGCAGGTGAGAGAGTTGATGAAGCAAAGAGGATTAAACAAAATACCTGGACGTAGCGTATTTGAGATGGatatcaattataatatttcatatgcCAAAGTGGCAGCTTTTGCCTA 2132 0.4156 MFSIRRILHCTPKFCIQRKCLSYVPYHPPPLEPAELRPTFDSSLRSISSHPSFYLLSICRNIDSLKKVHSLLHVHGMTGDLLCATKLVSLYGSFGFAKYARLVFDQMPSPDFYSWKVMIRWYFLNDMYREIVPFYASMRASVEGLDDVVFSIVLKACCELRDLVQGRKVHCQIVKAKTADSFVLTILVDMYSKCGEVRSARDVFDEIFDRNVISWTSMIVAYVQNDCGEEGLRLFNRMREGLIAGNQFTVGSLVTACGKLGYLHQGKWVHGYIIKNGIELNSFLTTSLLDTYAKCGDIRDARSVYDELSTADLVSWTAMIVGYTQRGQPGKSLKLFMDGKGTGLLPNSVTIASLLSACAQLGNRSVGRSLHALIVELGLDSPTVRNALVDMYAKCHMIVNARYIFETTMEKDVISWNSIISGYAQSGSAYEALQLFQRMRLASYESPDAVTLVSVLTACTSLGALQLGSSLHAFSLKNGRLSSSIYVGTALLNFYAKCGDAKSARMVFDGMGVKNTVTWSAMIGGCGMQGDGSGSLALFRDMLKEEYEPNEVVFTTILTACSHAGMVGEGWWFFNLMCQELNFVPSMKHYACVVDLLARAGNLEEALDFINKMSIQPNVSVFGAFLHGCGLHSRFDLGEVAIRRMLELHPHEASYYVLMSNLYASDGRWSQVKQVRELMKQRGLNKIPGRSVFEMDINYNISYAKVAAFA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00937 710 Pfam E motif 632 692 IPR046848 -
Bva11g00937 710 Gene3D Tetratricopeptide repeat domain 265 381 IPR011990 GO:0005515
Bva11g00937 710 Pfam PPR repeat 286 308 IPR002885 -
Bva11g00937 710 Pfam PPR repeat 414 440 IPR002885 -
Bva11g00937 710 Pfam PPR repeat 213 240 IPR002885 -
Bva11g00937 710 Pfam PPR repeat 184 211 IPR002885 -
Bva11g00937 710 Pfam PPR repeat 314 337 IPR002885 -
Bva11g00937 710 Pfam PPR repeat 590 613 IPR002885 -
Bva11g00937 710 Pfam PPR repeat 489 512 IPR002885 -
Bva11g00937 710 PANTHER OS07G0578800 PROTEIN-RELATED 59 708 IPR045215 GO:0003723|GO:0009451
Bva11g00937 710 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 312 346 IPR002885 -
Bva11g00937 710 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 412 446 IPR002885 -
Bva11g00937 710 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Bva11g00937 710 Pfam PPR repeat family 514 562 IPR002885 -
Bva11g00937 710 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 515 549 IPR002885 -
Bva11g00937 710 Gene3D Tetratricopeptide repeat domain 144 264 IPR011990 GO:0005515
Bva11g00937 710 Gene3D Tetratricopeptide repeat domain 489 699 IPR011990 GO:0005515
Bva11g00937 710 Gene3D Tetratricopeptide repeat domain 382 468 IPR011990 GO:0005515
Bva11g00937 710 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 59 708 - -
Bva11g00937 710 TIGRFAM PPR: pentatricopeptide repeat domain 213 240 IPR002885 -
Bva11g00937 710 TIGRFAM PPR: pentatricopeptide repeat domain 590 614 IPR002885 -
Bva11g00937 710 TIGRFAM PPR: pentatricopeptide repeat domain 414 445 IPR002885 -
Bva11g00937 710 TIGRFAM PPR: pentatricopeptide repeat domain 517 551 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00937 Bva-Chr11 11425566 11428375 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00937 11 11425566 11428375 Bva11g00937 11 11425566 11428375 ECH