Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00925 ATGGCGACTCTACCATTCTCAGCAACCTGTGGACAATCTAAGTCTGCTTCACACCCCAAATTTGACTCTAGATTTACGGATTTCTATCGAAGACTCAATCATTCAAGTTTGTTTCTCATCACAACGTCGAGCTCCAGAATGGCAAGAAATCTGTGTGTGAAGAATGTTGCTAGCAATAAAAAGCAGCAAGTGAAGGAAACCACTAGGGACACTACTGGAGAAGCCTTTGTTCCAGATTCTGCATCCATTGCTTCGAGCATCAAATATCGTGCTGAGTTCACCCCGTCTTTTTCTCCAGAGAAGTTTGAGCTCAGCAAGGCATTCTTTGCAACTGCACAGAGCGTTCGTGATATCCTCATAATAAATTGGAATGCTACATATGATTACTATGAGAAGATGAACGTTAAGCAAGCATATTATATGTCTATGGAGTATCTACAGGGTAGGGCATTGCTAAATGCAATTGGTAATTTACAGCTCTCAGGGCCTTATGCAGAGGCACTCAAAAGGCTGGGTATCAACTTAGAGAATGTGGCTAATCAGGAGCCAGATGCTGCACTTGGGAATGGTGGATTAGGTCGTCTAGCTTCTTGCTTTCTGGACTCCTTGGCAACACTGAATTACCCTGCATGGGGATACGGACTTAGGTACAAGTATGGTCTATTCAAGCAGCGCATAACAAAAGAAGGTCAGGAGGAAGCTGCTGAGAGTTGGCTTGAGATGGGAAATCCGTGGGAAATTGCGAGAAATGATGTCTCATATCCGGTGAAATTCTATGGAGAAGTCATTTCAGGGCCAAATGGAAATAAAGAATGGGTTGGAGGAGAGAATATATGGGCTATTGCTTATGATGTTCCTACACCTGGATACAAAACTAAAACCACTATAAACCTCCGGTTATGGTCTACTAAAGTTTCACCAgaagaatttgatttaaaagcTTTCAATGCTGGAGATCATGCCAAAGCATATGCTGCCATGAAGAATGCCGAGAAGATCTGCTACATATTGTACCCTGGGGATGAATCAATAGAAGGAAAGACACTCCGATTGAAGCAACAGTATACATTATGCTCTGCTTCTCTCCAAGATATTATTGCGCGTTTTGAAAAGAGATCAGGGAATACAGTGAATTGGGACAATTTCCCGGACAAAGTAGTGGTCCAAATGAATGATACTCACCCAACACTCTGCATTCCAGAGCTAATTAGgatattgattgatgtaaAGGGTTTAAGCTGGGAGGAAGCCTGGGCTATAACGAGAAGAACGGTGGCTTACACGAACCACACGGTTCTTCCCGAGGCACTAGAGAAATGGAATCTGAAACTTCTGGAAGAGTTGCTTCCCCGACATGTAGAGATAATAAGAATGATAGATGAGGAGTTGGTTCAAGAAATTATTGCTGAGTATGGCACCGATGATCTTGAACTTCtgcaacaaaaatttaaaaagatgaGAATACTAGAAAATATAGAGTTGCCTAACTCAGTTGCGGATTTGCTTAATAGCTTAAATGAGAAGTCTGACGTTATTTCTACTGAGGAAGTTGATGAGAAGTCTGATATTGTTGATTCTACCGAAGAAGTTGATGCAAATGATGGCGAGGATACtatcaagaaaacaaagggGACATTTGAAGTTGATCCAAAACTGCCAATGATGGTTCGCATGGCTAATCTATGTGTTGTTGGGGGGTTTTCTGTAAATGGTGTAGCTGAGATTCATAGCAAGATAGTGAAAGACGAAGTCTTCAATGAGTTTTATGAGTTGTGGCCTGAGAAGTTTcagaataaaacaaatgggGTGACGCCCAGAAGATGGATCCGTTTCTGCAATCCTGATCTCAGTAATATCATAACTAAGTGGATTGGAACAGAAGACTGGGTAACAGACCTAGAGAAATTGGCAGTGCTTCGCaagTTTGCTAATGATGAAAATCTACAATTAGAGTGGAGAgaagcaaaaagaagaaacaagattAAGGTTGCATCATATCTCATAGAGAAAACAGGTTACGTAGTCAGTCCAGATGCAATGTTCGATGTACAGGTCAAGCGCATTCATGAATACAAAAGGCAGTTATTGAATATCATGGGAATTGTTTATCGCTacaaaaagatgaaagaaatgaGTTctgaggaaagaaagaaaaagtttgtTCCTAGGGTTTGTATTTTCGGGGGAAAAGCATTTGCCACATATGTTCAAGCAAAGAGGATTGTGAAATTCATCACAGATGTAGGAGCTACAGTAAACAATGATCCAGAGATTGGAGATCTTTTGAagGTTGTATTTGTTCCTGATTACAACGTCAGTGTCGCAGAAATGCTAATTCCCGGTAGTGAGTTATCCCAGCACATCAGCACGGCTGGAATGGAGGCCAGTGGAACTAGCAACATGAAATTCTCCATGAATGGATGTATCCTAATAGGAACTCTAGATGGGGCTAATGTTGAAATCAGAGAAGAGGTTGGAGAAGATaacttcttcctttttggtGCACGAGCTCACGAAATTACTGGGCTACGGAAAGAAAGAGCTGAAGGAAAGTTTGTACCAGACCCACGGTTTGAAGAAGTGAAGGCATTTGTTAGGAGTGGCGTTTTTGGCCCATACAACTATGAAGAACTGATGGGATCCTTGGAGGGGAATGAAGGCTATGGCCGTGCTGATTACTTCCTCGTGGGCAAGGACTTCCCAAGCTACTTAGAGTGCCAAGAGATGGTTGATGAGGCATATCAAGACCAGAAAAGGTGGACGAGAATGTCAATCTTGAACACTGCTGGTTCTTACAAATTCAGCAGTGACAGGACCATTCATGAATATGCAAGAGATATTTGGAGGATTGAACCGGTACTACTGCCCTA 2870 0.3983 MATLPFSATCGQSKSASHPKFDSRFTDFYRRLNHSSLFLITTSSSRMARNLCVKNVASNKKQQVKETTRDTTGEEKFELSKAFFATAQSVRDILIINWNATYDYYEKMNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYAEALKRLGINLENVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKEGQEEAAESWLEMGNPWEIARNDVSYPVKFYGEVISGPNGNKEWVGGENIWAIAYDVPTPGYKTKTTINLRLWSTKVSPEEFDLKAFNAGDHAKAYAAMKNAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGNTVNWDNFPDKVVVQMNDTHPTLCIPELIRILIDVKGLSWEEAWAITRRTVAYTNHTVLPEALEKWNLKLLEELLPRHVEIIRMIDEELVQEIIAEYGTDDLELLQQKFKKMRILENIELPNSVADLLNSLNEKSDVISTEEVDEKSDIVDSTEEVDANDGEDTIKKTKGTFEVDPKLPMMVRMANLCVVGGFSVNGVAEIHSKIVKDEVFNEFYELWPEKFQNKTNGVTPRRWIRFCNPDLSNIITKWIGTEDWVTDLEKLAVLRKFANDENLQLEWREAKRRNKIKVASYLIEKTGYVVSPDAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKEMSSEERKKKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNNDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFSMNGCILIGTLDGANVEIREEVGEDNFFLFGARAHEITGLRKERAEGKFVPDPRFEEVKAFVRSGVFGPYNYEELMGSLEGNEGYGRADYFLVGKDFPSYLECQEMVDEAYQDQKRWTRMSILNTAGSYKFSSDRTIHEYARDIWRIEPVLLP 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00925 931 PIRSF Glucan_phosphorylase_GlgP 40 931 IPR000811 GO:0005975|GO:0008184
Bva11g00925 931 Gene3D Glycogen Phosphorylase B; 581 910 - -
Bva11g00925 931 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 74 931 - -
Bva11g00925 931 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 524 925 IPR011833 GO:0004645|GO:0005975|GO:0030170
Bva11g00925 931 CDD GT35_Glycogen_Phosphorylase 61 925 - -
Bva11g00925 931 PANTHER GLYCOGEN PHOSPHORYLASE 74 931 IPR000811 GO:0005975|GO:0008184
Bva11g00925 931 Gene3D Glycogen Phosphorylase B; 44 580 - -
Bva11g00925 931 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 928 - -
Bva11g00925 931 Pfam Carbohydrate phosphorylase 143 925 IPR000811 GO:0005975|GO:0008184
Bva11g00925 931 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 769 781 IPR035090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00925 Bva-Chr11 11378441 11384708 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00925 11 11378441 11384708 Bva11g00925 11 11378441 11384708 ECH