Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00842 ATGAATATTATAAAGTACCTAGCTCTGGTTTTAGCACAGTTGAAATGGGCATTGGATTTTCTCCTCTACCACCCTTTCTACAAGCTCTGTAGACCTGATATGCCAGTGATTGGAGGGGAAGTGAAGGTTCGCCACTATGAGCCAAACCCTAGCTCTGATGAAGAAGTGGATTGTGCTGTGTGCCTCTGCAAGATCAGAGAGGGTGAAGAGATTAGAGTGTTGAGGTGTGAGCATGTCTTCCACAGAGGTTGTTTGGAGAGATGGGTTGGTTTCAATGCTACTTGCCCTATTTGCAGGGACCTTGTGGGTCCTCGTAGGGCAATTACTGAGCTTGGAGCTGAGGTGatagaatttcaattttggtctttcagcTCTAGAGACCATGAGAGATGGTGGCTACGCTA 404 0.4431 MNIIKYLALVLAQLKWALDFLLYHPFYKLCRPDMPVIGGEVKVRHYEPNPSSDEEVDCAVCLCKIREGEEIRVLRCEHVFHRGCLERWVGFNATCPICRDLVGPRRAITELGAEVIEFQFWSFSSRDHERWWLR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00842 134 PANTHER RING ZINC FINGER PROTEIN-RELATED 4 127 - -
Bva11g00842 134 SUPERFAMILY RING/U-box 52 107 - -
Bva11g00842 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 105 IPR013083 -
Bva11g00842 134 SMART ring_2 58 98 IPR001841 -
Bva11g00842 134 Pfam Ring finger domain 57 99 IPR001841 -
Bva11g00842 134 ProSiteProfiles Zinc finger RING-type profile. 58 99 IPR001841 -
Bva11g00842 134 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 4 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00842 Bva-Chr11 10953922 10954755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00842 57 99 C3H Transcription Factor Family AT1G15100 63.636 1.05e-14 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00842 11 10953922 10954755 Bva11g00842 11 10953922 10954755 ECH