Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00841 ATGATTATGAAGTGCCTAGCTCTAGTTCTAGCCCAGTTGAAATGGGCACTAGATTTTCTTCTCTACCACCCTTTCTACAAGCTTTGTAATTGTAAAACTGATGAGATGCCGGCAATTAAAGGAGAAGTGAAGATTTGCAACTATGAGCCAAACCCTAGCTCTATTGAAGACGTGGATTGTGCTGTGTGTCTCTGCAAGATCAGAGAAGGTGAAGAGATTGGAGTTTTGAGGTGTGAGCATTTCTTCCACAGGATTTGTCTGGAGAGATGGGTAGGTTTCAAAGTCAGATATGCTACTTGCCCTATTTGCAGAGACCTTGTGGGTCAGTCCAGGGAAATCACTGAGCATGGAGCTGAGGTGATAGAATTTCAGTTTTGGTCTTTCAGTTCTAGAGACCGTGATAGATGGTGGCTACGCTA 419 0.4368 MIMKCLALVLAQLKWALDFLLYHPFYKLCNCKTDEMPAIKGEVKICNYEPNPSSIEDVDCAVCLCKIREGEEIGVLRCEHFFHRICLERWVGFKVRYATCPICRDLVGQSREITEHGAEVIEFQFWSFSSRDRDRWWLR 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00841 139 SUPERFAMILY RING/U-box 54 113 - -
Bva11g00841 139 PANTHER RING ZINC FINGER PROTEIN-RELATED 6 132 - -
Bva11g00841 139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 109 IPR013083 -
Bva11g00841 139 ProSiteProfiles Zinc finger RING-type profile. 60 104 IPR001841 -
Bva11g00841 139 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 6 132 - -
Bva11g00841 139 SMART ring_2 60 103 IPR001841 -
Bva11g00841 139 Pfam Ring finger domain 59 104 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00841 Bva-Chr11 10945493 10946155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00841 37 122 C3H Transcription Factor Family AT4G33565 28.736 3.43e-10 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00841 11 10945493 10946155 Bva11g00841 11 10945493 10946155 ECH